Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lele48g1240 | ATGGGGAAGGAATGGTATTGGACTGGAAGATCATCAAAACGAGCGGAAGGAGGAGACGCGGATGCACAGAACCATTCAGGTTGCATGTGTGCCTTTTTTCAGTTCTTTGATTTTCATCCTATTCACTTTCCCATTCAACAGCAGCAACCTTCTTCCAAGCTTCCCTCTGACAACCCAGAAGACCAGAGCATCCCAGAAGGAGCTGAAGCGCCTAGAAATAGCTTGGAATCAGAGGATGGTACAATGTCCTTTATCTCAAAAGAGGAAGATTTAAAAATCCCGAAGAGAATGCAAATCAAAACGAGCAGAAGAGTCCTGGGAGGAAATGAAAGCGATCTTTCATCAGAAATCAGCAACTCTCCATGTACAAAAACACCAACTTTGGTTGCCAGATTGATGGGTTTAGATCTTCTTCCCGATGCTCAATCTCCTTCTTCTACAATATCATGTATATCTACTCCAAACACACAGGGGAATTCGCGCCTTCACCTTTATAAACAGAGGCGAAACATCCTAACAAAACCCAGAAAGAGTACAGACAGTGATATTGCAGCTTCTCGTTCCTTGCCCGAGACTCCTAGAATATCCTCTGCAAGAAGATCAGATGTTGATCATAGGCTCTCTCTCCAAATCAACAAAGAAAATCTGGGTCTTGGTGAGGAATTGGCGCTCCCTAGATTTTCATTTTCAAACAGGAAATTCGAAGAGCAAAGCTGCAGAAGTCCAAGCCATTATGCAAGACAAATTGTTAGACAGGTTAAAGAAAGTGTGAGCCGGAAAGTTGGGCTTGACATCACCAACGCTGTAAGAAACAGAGAGCAAACGAAAGAGGAACTTCTTGTCCAAATCAGAGTCAATAAATCTCCAAAGACATCAATGAAAGTAATAGATGAATCCAGTCCCGGAAAGAATCCAAGTCCCCTTAGTTCTTCCCCAAGGCTCATATTTATGGAAGCCAAGCAGAAGCCAACCACCAAACGTCCATCGCTACTTAACCCAAAAGATCAAAATTCACACCCAGTAAAACTACCAACACATCCACCAATCAACATTCAACCGCAGAATCCAAGAGTTTTGACGAAGTCAAAACCTCAAGCATTTGCCGAGCAGGAGTTGCAAAACCAGAAATCAGTCCCAAAATTCAAGAAAGATGCGGCCAATGCAAGGTTTAGTGCAAGGCTCAAAAAACCCCGTCAGACATCAGATATAATAAAAAACAAGCAAGAAGAGTCTTTCGTTCGTCCTCCACGTCCATCACCCACCAGAGCCAATGACAGTAAAAGCAAGAGAACAAGCAATCTTCTCAACCTCACCAGTATCCCAAATCTTCGTCCTGTCAAGACAGATCCTTCTCCTTCAGAGACCAAAATTCCTCAGAAACAGCCACAGGAACCAGATGTTCAACGATCAAAACGCAGCTCACAGTTATCTAGTTGTCCGAGCCAAGCGTACAAACAAGAAGCGAAATGGATACTCGCGACCCGAGAAGGCAACGCCGAAGAAGACGAGAAATATAACGGTGCATCCACGACCGGAGTTTGTGGACCATCAGAGTTCGAGTACGTCAAAGACATATTGAACCGTACCACTGAGGGAAACGAAGGTGGCAGAAATCGAGTGTCCTTGGACCCTTCGATTTTTCACCATCTCGAACAGTACTACTACCCCACCTCAATTTCCACTGTATGCTCCGTCAGCCATGTCGCAGAAAGAAACAACCAACTAGGTCTCCGTTGCAACCGGAAATTACAGTTTGATTTGGTCGATGAAATTCTAGGGGAGATTCAAAAACCCTGGGTAAAACAAGACCGTAATTACCATGGATCTAATGTATTAGCTTCCCAATTGATGGCGGAAGCAGTGTGGAAGAGAATACGAAGCTTCCCGGAAGCACATTGTGAAGTACTGGAAGACATTGATGAGTTGATTGAAAGAGAGGATTTGGGGAAGATGATGAAAGAGGGATTAGATGGTGAAGAAGAAGAGTTAGTGGCAGAAATTGGGAGGAGCATACTGGAGACGCTTGTGCACGAGGAGGTTGCGGCATTTGGCGCGGAGTAA | 2061 | 0.4444 | MGKEWYWTGRSSKRAEGGDADAQNHSGCMCAFFQFFDFHPIHFPIQQQQPSSKLPSDNPEDQSIPEGAEAPRNSLESEDGTMSFISKEEDLKIPKRMQIKTSRRVLGGNESDLSSEISNSPCTKTPTLVARLMGLDLLPDAQSPSSTISCISTPNTQGNSRLHLYKQRRNILTKPRKSTDSDIAASRSLPETPRISSARRSDVDHRLSLQINKENLGLGEELALPRFSFSNRKFEEQSCRSPSHYARQIVRQVKESVSRKVGLDITNAVRNREQTKEELLVQIRVNKSPKTSMKVIDESSPGKNPSPLSSSPRLIFMEAKQKPTTKRPSLLNPKDQNSHPVKLPTHPPINIQPQNPRVLTKSKPQAFAEQELQNQKSVPKFKKDAANARFSARLKKPRQTSDIIKNKQEESFVRPPRPSPTRANDSKSKRTSNLLNLTSIPNLRPVKTDPSPSETKIPQKQPQEPDVQRSKRSSQLSSCPSQAYKQEAKWILATREGNAEEDEKYNGASTTGVCGPSEFEYVKDILNRTTEGNEGGRNRVSLDPSIFHHLEQYYYPTSISTVCSVSHVAERNNQLGLRCNRKLQFDLVDEILGEIQKPWVKQDRNYHGSNVLASQLMAEAVWKRIRSFPEAHCEVLEDIDELIEREDLGKMMKEGLDGEEEELVAEIGRSILETLVHEEVAAFGAE | 686 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lele48g1240 | 686 | MobiDBLite | consensus disorder prediction | 389 | 412 | - | - | |
| Lele48g1240 | 686 | MobiDBLite | consensus disorder prediction | 46 | 90 | - | - | |
| Lele48g1240 | 686 | Pfam | DUF761-associated sequence motif | 114 | 143 | IPR032795 | - | |
| Lele48g1240 | 686 | MobiDBLite | consensus disorder prediction | 421 | 482 | - | - | |
| Lele48g1240 | 686 | MobiDBLite | consensus disorder prediction | 389 | 482 | - | - | |
| Lele48g1240 | 686 | MobiDBLite | consensus disorder prediction | 291 | 356 | - | - | |
| Lele48g1240 | 686 | Pfam | Domain of unknown function (DUF4378) | 518 | 678 | IPR025486 | - | |
| Lele48g1240 | 686 | MobiDBLite | consensus disorder prediction | 1 | 21 | - | - | |
| Lele48g1240 | 686 | MobiDBLite | consensus disorder prediction | 325 | 339 | - | - | |
| Lele48g1240 | 686 | PANTHER | LOW PROTEIN: M-PHASE INDUCER PHOSPHATASE-LIKE PROTEIN | 1 | 684 | - | - | |
| Lele48g1240 | 686 | MobiDBLite | consensus disorder prediction | 172 | 202 | - | - | |
| Lele48g1240 | 686 | MobiDBLite | consensus disorder prediction | 291 | 311 | - | - | |
| Lele48g1240 | 686 | MobiDBLite | consensus disorder prediction | 177 | 195 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lele48g1240 | Lele-ChrLele48 | 16781666 | 16784147 | Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Lele48g1240 | 120 | 685 | TRM (TON1 Recruiting Motif) Superfamily | AT5G62170 | 32.528 | 7.18e-47 | 173 |