Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele48g1239 ATGGAAGTAAATCAAAACCAAGGAATCGAGAACAAACTTGAGGATTTTAATGACGAGGAAGAAAGCCACAGTGCGGATATATCTCCTTCTGAGACGACGTCAATGGTGGAAGGGGCGGAGTCACATTTTCCGGAGCCAGTGCCACGGTCGCCGCCTGCGGCACCGTTGAAAGAAGAGTCCACGGAGGCAGAGCAAAGCATGGACGAGTCTCTTCCCATGAACCTTATCCAGGTACCGTTAACGATGTCAACGCCGGGGAGAAACGCGGTGGTACCGGCCAGAAAACCTTCCAAGGATCGTCATACAAAAGTGGAAGGCCGTGGCAGGAGAATCCGAATGCCGGCCACGTGTGCGGCCAGGATCTTCCAGCTCACGCGAGAGCTCGGCCACAAGTCAGACGGAGAGACAATCCGGTGGCTTCTTGAGCACGCTGAACAGGCTATAATAGAGGCCACCGGCACGGGAACCATACCTGCAATCGCCGTCTCCGTTGGAGGAACCCTAAAGATCCCAACCTCCTTCCCGGCAAGACTAGATGGGGAAGAAACCCCTAGAAAACGAAGACGACGGGCATCGAACAGTGAGTTCATTGACGTAAACGATCCGACCTCAATCTCTTCAAGGCTAGCTCCGGTTGCTCCAATTTCATGCGGAGCAGTTTCTACTACCGGAGGAGGATGTGGCGGCGGCGTTGCTCCGGGAGGACTTGTCCCTTTGTGGCCAGTGGGTGGGACCAACGCATCGGGACCCTTCTTGATGTTCCCAAATACTGCTGCTTCAGCAAATCAACCACAATACTGGGCAATTCCGGCCAGTGCGACGCCGTTTTTCAATGTCCAAGCGAGACCCATTTCGAACTTCGTCTCTGCGATGATGCACCCCAGTGAGCAATTAGGGCCTTCTTCAGGTTCCATGAACGTTTCAAACGGTAATTCGGTTTCGGGTTCTGCGAACTCTTCATCGACGATGGCTCCTAGTTTGAGCTCAGGAACGAGTCTGAGTGCCAGTGCTCCTCCAGCTACGACGACGGCGTCGGCGACCCAGATGCGTAGGGATTTCTCCTTGGAAATTTACGACAAGAAAGAATTGCACTTTTTGGGTCCATCTGCGAATTCTGAGCCGCCGACGGGGCAGGCTGGGGTCCATTTACAATTGTCCACAGCTGGATGCGTTGTGTGGACTGCCTCGTTCTTGGATACACACAGCTTCAAGAAATCACCGAACACTGCTTTTAGCTTCTCTGCCCCACTTAATGATACTTCGAATGATGGTAGGTCGAGAAGCTTTGGAGGTGAGGCAGGGAAGTGTAGTAGAAGGGGAAGAGATCATGTAGAGGGATTTGGTGATGGTAGTAGGAGGCAGGTGGGGGGGGGGCAAGTTTCGGGTGGTGGGATGAGGAGTGCCCCTCCTAGTGGGATAAAGCATGGATTCAAAGAAAGAATGAGGTGGATATGGGAAAAGGGAGTTGAGAAGAGGTTGCAGAAGCATCTGAGAAGGCTGGGTGCGGAGGTCAGGGTGTTAATGAGAACAAATTCTGACAATAACCCTCTGTCAGTGGACACAAGCCCGGAGAGGTTAAGACAGGAAGGGAGACCATTTAGGTTTGAGTTTGGGGGCTTTCTAAAGGAAAGATGGAATGCGTATTATGGAAAGGGCAGCAAACCCACAATTGGTGAAGCTCGCACGAGAATTGCAAAACGAGTTGAATGCGGTTTTGATTACCTTGAGGAAAATGACTTGTTGAGGTTACGGGCTATCTCGGTGCCTTTTGAGGATGAGGTGGAGGATAGGATGGTTTGGAGGGGATCTGCAGGCCCTGATTACAGTGTGGCTGAGATGTATTGGAGGTTGAGGGGTTTTGAACGGGTGAAGGAAGACTTGGCGTGGAGGAAAATATGGAAATGGAAGGGTCCGAGGAGGGTGCAGGCGCTGATGTGGTTGGCCCTACACGACAGACTCTTAACAGCAAAAAGGAGGAGTATTATGATGGGATCTCAGGCTGTATGTGGGAGGTGTCGTTTAATGGATGAAGATTTGCTACATGTGTTGAGAGACTGGTCAAGAGAAGATGGTATGGAAAGAAGAGAATGGGATCTCAGACTACTCTATGAGTTCTCAAGTTCTGACATGAGAAAGAATATGGAACGGTACTGGAAATACAGCAAAGGCGATCAACTGGTCAACAACAATAATGAAGATGAACAATACAACCAGGTTGAATGCGAGATCATGGCGAAGAAGATTGAGAATCTTCAAATTTGTCAAAGGAAACTAATGGGAGAAGAGTTGAGTTCATGTTCAATTAAAGAACTTGAAGGAATAGAGAATCAGCTTCTCACAAGTTTGCAAAACGTCAGGCTTAGAAAGAGTCAGCTATTCCGAGACCAAATTCTGCAGCTACATGACAAGGGAAGAAATTTGGTCCAAGAGAACGCCGGCTTAAATAAATTGTTTGGAAGAACACAATCTCAGGAGCAATGGGCAAAGCACAAAGAAGCAGAAGTAGAAACAGAATTATGTATTGGACTCCCTCAAAATCGATGA 2544 0.4945 MEVNQNQGIENKLEDFNDEEESHSADISPSETTSMVEGAESHFPEPVPRSPPAAPLKEESTEAEQSMDESLPMNLIQVPLTMSTPGRNAVVPARKPSKDRHTKVEGRGRRIRMPATCAARIFQLTRELGHKSDGETIRWLLEHAEQAIIEATGTGTIPAIAVSVGGTLKIPTSFPARLDGEETPRKRRRRASNSEFIDVNDPTSISSRLAPVAPISCGAVSTTGGGCGGGVAPGGLVPLWPVGGTNASGPFLMFPNTAASANQPQYWAIPASATPFFNVQARPISNFVSAMMHPSEQLGPSSGSMNVSNGNSVSGSANSSSTMAPSLSSGTSLSASAPPATTTASATQMRRDFSLEIYDKKELHFLGPSANSEPPTGQAGVHLQLSTAGCVVWTASFLDTHSFKKSPNTAFSFSAPLNDTSNDGRSRSFGGEAGKCSRRGRDHVEGFGDGSRRQVGGGQVSGGGMRSAPPSGIKHGFKERMRWIWEKGVEKRLQKHLRRLGAEVRVLMRTNSDNNPLSVDTSPERLRQEGRPFRFEFGGFLKERWNAYYGKGSKPTIGEARTRIAKRVECGFDYLEENDLLRLRAISVPFEDEVEDRMVWRGSAGPDYSVAEMYWRLRGFERVKEDLAWRKIWKWKGPRRVQALMWLALHDRLLTAKRRSIMMGSQAVCGRCRLMDEDLLHVLRDWSREDGMERREWDLRLLYEFSSSDMRKNMERYWKYSKGDQLVNNNNEDEQYNQVECEIMAKKIENLQICQRKLMGEELSSCSIKELEGIENQLLTSLQNVRLRKSQLFRDQILQLHDKGRNLVQENAGLNKLFGRTQSQEQWAKHKEAEVETELCIGLPQNR 847
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele48g1239 847 MobiDBLite consensus disorder prediction 1 67 - -
Lele48g1239 847 MobiDBLite consensus disorder prediction 93 107 - -
Lele48g1239 847 MobiDBLite consensus disorder prediction 85 107 - -
Lele48g1239 847 ProSiteProfiles K-box domain profile. 734 824 IPR002487 GO:0003700|GO:0005634|GO:0006355
Lele48g1239 847 MobiDBLite consensus disorder prediction 12 26 - -
Lele48g1239 847 MobiDBLite consensus disorder prediction 421 473 - -
Lele48g1239 847 MobiDBLite consensus disorder prediction 432 449 - -
Lele48g1239 847 MobiDBLite consensus disorder prediction 295 348 - -
Lele48g1239 847 ProSiteProfiles TCP domain profile. 97 151 IPR017887 -
Lele48g1239 847 Pfam TCP family transcription factor 97 163 IPR017887 -
Lele48g1239 847 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 65 358 IPR005333 GO:0003700
Lele48g1239 847 Pfam K-box region 730 816 IPR002487 GO:0003700|GO:0005634|GO:0006355
Lele48g1239 847 Pfam zinc-binding in reverse transcriptase 608 683 IPR026960 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele48g1239 Lele-ChrLele48 16759828 16774672 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele48g1239 85 366 TCP Transcription Factor Family AT5G51910 48.276 1.79e-64 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Lele48g1239 K-box 1e-21 No_clan