Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele48g1231 ATGAGAAACACAGCTGGTTCAAGCTCAAGGCCCACCACCCCATCCATTTTCCTTAACCACTGTTTAAAGCGTGGTCACTCTCCCAGCCCTAACCTAGCTGTCCCCGTCTACCTACTCATTTTCTTCGTCGATTCACACTTGAAAGGACACGAGGTTCAAGCTTCAGTGATTCCTATGTTTTCATTCACTTCTTCAGACCCATATCCTCTTAGGTCCAGATATACTAGTGATTTAGAGGTGGTGGAGTACACGTCCTCGCCGGCTTCCGATTGTGGCAGTGGCAACGGAGTTCGTTCTTTGGTTTTGTCCGACGAGGAGGTTTTGTTGGCTGCGACTCATCCGAAGAAACGTGCGGGGAGGAAAAAGTTCCGGGAGACTCGTCATCCGGTGTACAGGGGTGTTCGGAGGAGGAACTCCGGCAAGTGGGTGTGTGAAGTGCGGGAGCCCAATAAGAAAACAAGAATTTGGCTGGGGACGTTCCCCACCGCTGATATGGCTGCGAGGGCCCACGACGTGGCGGCGATCGCTCTGCGCGGCCGGTCAGCTTGTCTTAACTTTGCAGACTCTGCTTGGCGTCTGCCACTGCCGGCCTCAACTGAAGCCAAGGATATTCAGAAGGCAGCGGCGGAAGCTGCGGAGGCATTCCGGCCAGGGACAGAATCGGAGAGCGAGGAATTGAGGGCGGAAAATGCAGAGGCGACGACCAGCACGGCGGCCCCAGGGGCGGAGGAGCAAAGTATATTCATAATGGATGAAGAAGGAGTTCCGGGGATGCCGGAGTTGCTGAGGAACATGGCGGACGCGGTGCTGATGTCGCCTACTCATTGCTTTGTGGATCAGTACGATGGTGCTGACGTGGAAGTGGATGATGCTGAGGTGTCATTATGGAGTTATTCAATTTAA 903 0.5404 MRNTAGSSSRPTTPSIFLNHCLKRGHSPSPNLAVPVYLLIFFVDSHLKGHEVQASVIPMFSFTSSDPYPLRSRYTSDLEVVEYTSSPASDCGSGNGVRSLVLSDEEVLLAATHPKKRAGRKKFRETRHPVYRGVRRRNSGKWVCEVREPNKKTRIWLGTFPTADMAARAHDVAAIALRGRSACLNFADSAWRLPLPASTEAKDIQKAAAEAAEAFRPGTESESEELRAENAEATTSTAAPGAEEQSIFIMDEEGVPGMPELLRNMADAVLMSPTHCFVDQYDGADVEVDDAEVSLWSYSI 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele48g1231 300 ProSiteProfiles AP2/ERF domain profile. 130 187 IPR001471 GO:0003700|GO:0006355
Lele48g1231 300 SMART rav1_2 130 193 IPR001471 GO:0003700|GO:0006355
Lele48g1231 300 SUPERFAMILY DNA-binding domain 130 189 IPR016177 GO:0003677
Lele48g1231 300 Gene3D AP2/ERF domain 130 188 IPR036955 GO:0003700|GO:0006355
Lele48g1231 300 Pfam AP2 domain 129 179 IPR001471 GO:0003700|GO:0006355
Lele48g1231 300 PRINTS Ethylene responsive element binding protein signature 131 142 IPR001471 GO:0003700|GO:0006355
Lele48g1231 300 PRINTS Ethylene responsive element binding protein signature 153 169 IPR001471 GO:0003700|GO:0006355
Lele48g1231 300 MobiDBLite consensus disorder prediction 215 244 - -
Lele48g1231 300 CDD AP2 131 189 IPR001471 GO:0003700|GO:0006355
Lele48g1231 300 FunFam Ethylene-responsive transcription factor 2 129 188 - -
Lele48g1231 300 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D 98 298 IPR045277 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele48g1231 Lele-ChrLele48 16705274 16706346 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele48g1231 109 298 AP2-EREBP Transcription Factor Family AT4G25470 64.062 1.34e-73 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele48g1231 AP2 1.4e-14 CL0081