Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele48g1230 ATGGATAGCAACCCTCCTCCTCCAAGCTTGCCTCAACAAGAACAATCTTCTGCTCCTTCTGCTTCTTCGCCTTCTGTTTTGCAAGTGCCTTCGTCTCATGAGTCGTCTTCTTCTCCGAGGATTGTGAGATCGCCGGGTGGCTCGTCGTCATCGGGTCAGCATACCAGCAGGAGGCACGCCACGTTCCGGGGAATCCGGAGCCGGAGTGGGAAATGGGTGTCGGAGATACGGGAGCCTCGAAAAACCACGCGCATTTGGCTGGGGACGTATCCGACGCCGGAGATGGCTGCCGCCGCGTATGACGTGGCTGTTCTTGCATTGAAAGGGCCTGATACCACCCTCAACTTCCCCAATTTGATCCTCTCCTACCCGATCCCGGCGTCATTGTCGGCCGCGGATATTCGTGCGGCGGCGTCAGCAGCTGCGGAGGCCAGGCTGGTGAGGTCTGCGGAAACCGGTGGACAAAAAGCCGGAGAAGGAGGAGAAGGAAGCCAGGGCGAGGGCTGGAGCGGGTCAGGAGAAGTGACGGAGAAAAGCGAGGAATTTATCGATGAGGACGAGCTCTTGAATATGCCGAGTTTGCTGGATGACATGGCGAGGGGAATGCAGGTGAGTCCGCCGAGGATGAAGTCACCGTACGCTTCGGATGATTCGCCGCCGAATTCAGATCATGGAGATAGCCTCTGGAGTTTTTGA 696 0.5747 MDSNPPPPSLPQQEQSSAPSASSPSVLQVPSSHESSSSPRIVRSPGGSSSSGQHTSRRHATFRGIRSRSGKWVSEIREPRKTTRIWLGTYPTPEMAAAAYDVAVLALKGPDTTLNFPNLILSYPIPASLSAADIRAAASAAAEARLVRSAETGGQKAGEGGEGSQGEGWSGSGEVTEKSEEFIDEDELLNMPSLLDDMARGMQVSPPRMKSPYASDDSPPNSDHGDSLWSF 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele48g1230 231 Gene3D AP2/ERF domain 61 118 IPR036955 GO:0003700|GO:0006355
Lele48g1230 231 CDD AP2 62 119 IPR001471 GO:0003700|GO:0006355
Lele48g1230 231 MobiDBLite consensus disorder prediction 1 71 - -
Lele48g1230 231 MobiDBLite consensus disorder prediction 14 58 - -
Lele48g1230 231 MobiDBLite consensus disorder prediction 151 231 - -
Lele48g1230 231 ProSiteProfiles AP2/ERF domain profile. 61 117 IPR001471 GO:0003700|GO:0006355
Lele48g1230 231 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 34 202 - -
Lele48g1230 231 Pfam AP2 domain 63 109 IPR001471 GO:0003700|GO:0006355
Lele48g1230 231 MobiDBLite consensus disorder prediction 215 231 - -
Lele48g1230 231 SMART rav1_2 61 123 IPR001471 GO:0003700|GO:0006355
Lele48g1230 231 SUPERFAMILY DNA-binding domain 62 118 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele48g1230 Lele-ChrLele48 16693448 16694143 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele48g1230 56 231 AP2-EREBP Transcription Factor Family AT5G52020 59.669 3.85e-54 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele48g1230 AP2 2.7e-09 CL0081