Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele48g1228 ATGTCCCTTTCTGCTTGCGAGTTTACTTCAATTATAATATTGATAAAGGATTTGCTCTGGGAAACTTCAGTTGCAACTGCTGCAAGTGGTTATGAAGCTTTGAAGACTCTCAGGAAATTCAGAGGCTTCTTCGACCTCGTCATCACCGACCTTAACATTCGAGGAATGAATGGATTTGAGCTCCAAAAGCGTGTCAAAAGCAAATTCCATCTTCCAGTCATCATTATGTCTGCAGATGGGAGGAAGAGTGTGATGTCCAAGAGTTTAGAGCAAGGAGCAGCGTTTTGCTTAGTGAAACCAGTTCGAAGAGAGGACTTGAGAGATGTGTGGCAGTATGCTGTGGCTGGCAGGAGAGAGAAACTTAGATTTGAGAATGGCAAAATTGTATCAGTAAGCGAAGAAGAAGAAGGAGACTCATCATCACCACCAGCAGTTAACATAGCCTCTACACAGAATTCAACATCGCCTAAAAAGCAAAGGAAGAAGTACGGAGCCAGAAAACGTAGCGAGGCGGTAGATAATCAAGAACTCGTATTCTGTGGTCCAAAGAGGTCCAAGATTTCCTGGACTGTTAATCTTCACAGTCGCTTCTTGTTGGCCTTAAGGCACCTTGGCATGGACAAGAAAGGAATCCTTGAGGGATTACCTGAGAGAGCTTTGAGTTCAAGGTTTGCTATGGGGCTTCCCACAGATCTCATCAGAGACATCCAAAAAAGACTCACTCGTTTTCATGAAATTAGTTATTATCATCAACCTTACAGTACTTACGGAAATCCCCAGATTCCTCAAAATCCTCCAACAACTAGACCATTTCTCGCCAATCAAACCAGACTGGCCCCACCAAACTACCATGGTGGGACCAATCATACTTACGGAAACTTCCAACAGCCCCATTATCATAATCTTCATCGCGCTATCGTAAATGGAGGAGGGTTCATGACTCCTGCAAATAATGGTTTGATGAGTAACTATTCCAATCCCTCACTGGTGGGGAACAACAGAAGCTTCAATTATGGTCCAACTAATCATTATAATAATAATAACAAACATGGGATGTTAGTGCCTTATGTAAGCTCTTGCCGGCAACCAAGTCCTGGGATATATTATAATAACCACCATGGAACTCAACTGATGAACAACAATAATAACGGTGGGACGACAGTGTCTTATGGAAGCTGTGGCTTCCAACCAAATCCTAGTACTCACTATAATAACCGCTATGGAACTCAACTGAACAACAACAAAAACGGTTCTCTTACAGTTGTTGCGTTGAATGGAGTTCAGAATGTTGGTTATACAGTTCATAGCAGTAATGGGAATGCTTCAAATAATGCAATTGTGCCTGTCTCATCCTCACTTGTGAGTCTGCCATCTTTGCCTCAGCAATCAATTAATGGTACTAGGAATGCTGTCACTTCAGTGAATCAGCAGGAAGCTGCCGAAATGGATGATCTTAACGAACTTTTCCTCATGTTAGACGATATGGTTCTTCTTGATGAGACTGCAAAGAGCCCTCGTGATGGTGTACGTTCAAGTTCTGACATTCTTAGCTCCTTCAATATTGAAGACTACATTGAGCTGGAAGATGGTGGTCATGTGGGCTCTCAAACAAATGAAAGAAGCGTCAGTGTTCTTCTTGACAATGACAAGTCCTCATCTTGCACCAGTGAAAACCCTAATTTGGTGGCGAGGAACGATACATCCACAAACTTGGAACTATTGGACATGCTCTTGGCGGAGCAGGCTAATTCTTCATCGGCAGGAAACCCAGCTCCTCAAGAGCAGGCAAGCCATCTTATGAAAGATTTGTTTGATTGGGACATGGATCTCATTGAAACCTTGTTCGATGCTGCAGACCCCAGCCAGAAGTGA 1872 0.4311 MSLSACEFTSIIILIKDLLWETSVATAASGYEALKTLRKFRGFFDLVITDLNIRGMNGFELQKRVKSKFHLPVIIMSADGRKSVMSKSLEQGAAFCLVKPVRREDLRDVWQYAVAGRREKLRFENGKIVSVSEEEEGDSSSPPAVNIASTQNSTSPKKQRKKYGARKRSEAVDNQELVFCGPKRSKISWTVNLHSRFLLALRHLGMDKKGILEGLPERALSSRFAMGLPTDLIRDIQKRLTRFHEISYYHQPYSTYGNPQIPQNPPTTRPFLANQTRLAPPNYHGGTNHTYGNFQQPHYHNLHRAIVNGGGFMTPANNGLMSNYSNPSLVGNNRSFNYGPTNHYNNNNKHGMLVPYVSSCRQPSPGIYYNNHHGTQLMNNNNNGGTTVSYGSCGFQPNPSTHYNNRYGTQLNNNKNGSLTVVALNGVQNVGYTVHSSNGNASNNAIVPVSSSLVSLPSLPQQSINGTRNAVTSVNQQEAAEMDDLNELFLMLDDMVLLDETAKSPRDGVRSSSDILSSFNIEDYIELEDGGHVGSQTNERSVSVLLDNDKSSSCTSENPNLVARNDTSTNLELLDMLLAEQANSSSAGNPAPQEQASHLMKDLFDWDMDLIETLFDAADPSQK 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele48g1228 623 Pfam Response regulator receiver domain 22 108 IPR001789 GO:0000160
Lele48g1228 623 PANTHER TWO-COMPONENT RESPONSE REGULATOR 20 218 IPR045279 GO:0009736
Lele48g1228 623 CDD REC_typeB_ARR-like 15 114 - -
Lele48g1228 623 Gene3D - 10 180 - -
Lele48g1228 623 MobiDBLite consensus disorder prediction 256 281 - -
Lele48g1228 623 MobiDBLite consensus disorder prediction 132 168 - -
Lele48g1228 623 SMART REC_2 1 110 IPR001789 GO:0000160
Lele48g1228 623 SUPERFAMILY CheY-like 22 119 IPR011006 -
Lele48g1228 623 MobiDBLite consensus disorder prediction 135 158 - -
Lele48g1228 623 ProSiteProfiles Response regulatory domain profile. 1 114 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele48g1228 Lele-ChrLele48 16677865 16681821 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele48g1228 9 215 Response Regulator Gene Family AT4G16110 33.645 5.68e-23 101
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lele48g1228 Response_reg 5.6e-17 CL0304