Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele48g1223 ATGGCACCTTCTCGGGTGGCTGGAGGGTTAGCCCATTCATCTAGTTCTGGAATATTCTATCAAGGAGATGGGCAATCACAGAATGCTGTTGATTCTCACTTAAGCTCATGTTTTGGTAACACATCCAACTCATTTCCTGGAACTCGGCGTTCAAATCTGGGTCCGGTTTCTGGTGACATGAGTAGTGCAATTCTAAACAGTGTGGCAAATTCAGGGCCAAGTGTTGGAGCAAGTTCATTAGTCACAGATGCTAACTCTGCACTATCTGTGGGACCCCGTTTGCAGAGAAGCGCTAGCAATAACACAGAATCATACTTACGTTTACCTGCATCACCCATGTCATTCTCCTCAAATAATATTAGTATTTCGGGGTCATCAGTTATAGATGGTTCTTCTGTAGTAAAACAGAGCTCTCATCAAGACCAGAATGTTCAACAACTGCAAAAGAATCATGAGCAAATGCAGGGTGCTTCTAGTGCAACTTCTCTGCCTGCAGCTCAAACTGGCCCAGCTCCAGTGCCAATAGGTACACGAGGACCTGGATCTGCATCTTTGATACAAGATCCAAATAATCTATCCCAGATGCATAAGAAACCTCGGATTGATATCAAGCAAGAAGATATAATGCATCAGCAGGTAATACAGCAACTTCTTCAGAGGCAGGACCACATGCAGTTCCAGGGTCGTAATCCCCAACTACAGGCTTTGCTGCAGCAGCAGAGACTGAAGCAACAGCAACAGCAGCAACAAATGCTTCAGTCAATGCCACAGTTACAGAGAGCTCACTTGCAACAACAGCAGCAGCAACATATGCAATTGAGGCAGCAATTACAACAACAAGCAACACAGCCGTTGTCTTCCATCAAGCGCCCATATGATAGTGGTGTGTGCACCCGTCGTTTGATGCAATACTTATATCATCAAAGGCAGCGACCAAATGATAATAGTATTGCCTATTGGAGAAAATTTGTAGCTGAATATTACTCTCCTCGTGCAAAGAAGCGGTGGTGTTTGTCATTATATGATAACGTCGGGCAACATACTCTTGGTGTTTTCCCCCAACCAGCTATGGATGCATGGCAGTGCGACATATGTGGTTCTAAATCAGGAAGGGGATTTGAGGCAACTTTTGAAGTACTCCCGAGACTCAACGAAATCAAATTTGGCAGTGGGGTGATTGATGAACTTATGTTTTTGGACTTGCCTCGTGAGTATAGATTTCCTTCTGGTTTAATGATGTTAGAATATGGAAAGGCAGTTCAAGAGAGCGTGCATGAGCAACTTCGTGTTGTTCGTGAGGGTCAACTTCGCATCATATTTACACAAGATCTGAAGATATTATCTTGGGAGTTTTGTGCAAGACGCCATGAAGAACTTATTTCTCGAAGGTTGGTTGCACCACAGGTCAGCCAATTGGTTCAAGTGGCTGAAAAGTGCCAGCGCTGTATTACTGAAAGTGGATCTGATGGGATTTCTCAGCAGGATTTGCAGACAAACAGCAATATGGTAATAACGGCTAGGTGTCAGCTGGCAAAGAGTTTGGACTTACAGTCTCTGAATGACTTAGGTTTCTCAAAACGATATGTGAGATGTTTGCAGATATCAGAGGTTGTGAATAGCATGAAAGATCTGATGGATTTCTGCCAAGAGCGGGAAGTTGGGGCACTTGAGGGCTTGAAAGATTATCCTAGGCATGCAACTGCAGCCAAGCTCCAGATGCAAAAGATGCAGGAGATGGAACAGTTAGCGAATGTTCAAGGTCTGCCAACTGACCGGAACACCCTTAATAAGCTAATGGCCTTGCATCCTGGATTCAATAACCAAATCAACAACAACCCTAACCTTGTTAATCGTGGTGCTTTAAGTGGATCTGCCCAAGCTGCATTGGCACTGTCTAACTACCAGAATCTCCTCACTAGGCAAAACTCCCTAAACTCAAGCCCTAACTCACTTCAGCAGGAAGCATCTTCTTCCTTCAGTAATTCAAACCAGAGCCCCTCTTCACACTTTCAAGGTGGCGCTGCTGCTTTGCCTCCAGGCCCCATGCAGAATTTACCTGTCAGTGGTTTCTCAAGTCCCCATCTATCTCCACAGCAGCAACATCAGCTACAACAATTTAAACAGCGCTCATTAAGTGGGAATAGCTTACTGCAACAAAATCATCCACAGGGCTCCCACACAAATCAGGCTCTACCTCCCCAGATGCTCCAGCAGCTAGTTCAGGAATTGTCGAATAACAGCAGTGGCGTAGGAGTTCAACCGCAGTTCCATGCTGGACCCAAACCCAATGGAAGTATTGCCAATAATGGTTTGGGTTTCGGAGGTAACCCTCCACCAACAACTGGAGGAACTTCCAATGTTTCAGGAAGTAACGGACCTGCTGCTGCGAGCAGGAGCAACAGCTTCAAAGCTGCTTCAAACAGTGATTCTTCTGCAGCTGGTGGCAATAGTGGATTCAACCAAAGAACATCCGATATACCACAAAATCTCTGCCTCCAAGATGTGGTTCAGGGTATTGCCCGCGAGTTCACCGACAATGGCTTCTTTAACAGTGACCTTGACGACTATGGGTGGAAGGCATGA 2583 0.4545 MAPSRVAGGLAHSSSSGIFYQGDGQSQNAVDSHLSSCFGNTSNSFPGTRRSNLGPVSGDMSSAILNSVANSGPSVGASSLVTDANSALSVGPRLQRSASNNTESYLRLPASPMSFSSNNISISGSSVIDGSSVVKQSSHQDQNVQQLQKNHEQMQGASSATSLPAAQTGPAPVPIGTRGPGSASLIQDPNNLSQMHKKPRIDIKQEDIMHQQVIQQLLQRQDHMQFQGRNPQLQALLQQQRLKQQQQQQQMLQSMPQLQRAHLQQQQQQHMQLRQQLQQQATQPLSSIKRPYDSGVCTRRLMQYLYHQRQRPNDNSIAYWRKFVAEYYSPRAKKRWCLSLYDNVGQHTLGVFPQPAMDAWQCDICGSKSGRGFEATFEVLPRLNEIKFGSGVIDELMFLDLPREYRFPSGLMMLEYGKAVQESVHEQLRVVREGQLRIIFTQDLKILSWEFCARRHEELISRRLVAPQVSQLVQVAEKCQRCITESGSDGISQQDLQTNSNMVITARCQLAKSLDLQSLNDLGFSKRYVRCLQISEVVNSMKDLMDFCQEREVGALEGLKDYPRHATAAKLQMQKMQEMEQLANVQGLPTDRNTLNKLMALHPGFNNQINNNPNLVNRGALSGSAQAALALSNYQNLLTRQNSLNSSPNSLQQEASSSFSNSNQSPSSHFQGGAAALPPGPMQNLPVSGFSSPHLSPQQQHQLQQFKQRSLSGNSLLQQNHPQGSHTNQALPPQMLQQLVQELSNNSSGVGVQPQFHAGPKPNGSIANNGLGFGGNPPPTTGGTSNVSGSNGPAAASRSNSFKAASNSDSSAAGGNSGFNQRTSDIPQNLCLQDVVQGIAREFTDNGFFNSDLDDYGWKA 860
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele48g1223 860 MobiDBLite consensus disorder prediction 131 166 - -
Lele48g1223 860 Coils Coil 260 283 - -
Lele48g1223 860 MobiDBLite consensus disorder prediction 131 193 - -
Lele48g1223 860 Pfam LIM-domain binding protein 300 560 IPR029005 -
Lele48g1223 860 MobiDBLite consensus disorder prediction 746 824 - -
Lele48g1223 860 PANTHER LIM DOMAIN-BINDING PROTEIN 41 849 IPR029005 -
Lele48g1223 860 MobiDBLite consensus disorder prediction 685 709 - -
Lele48g1223 860 MobiDBLite consensus disorder prediction 641 671 - -
Lele48g1223 860 MobiDBLite consensus disorder prediction 774 824 - -
Lele48g1223 860 MobiDBLite consensus disorder prediction 641 709 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele48g1223 Lele-ChrLele48 16616217 16621969 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele48g1223 288 566 C2H2 Transcription Factor Family AT1G43850 57.348 1.61e-105 344