Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele48g1216 ATGGGTTTCCTCCGGCGAATTTTCGGCGGCAAAAAGCCGGCCTCTCCGTCAGGAGCATCCCACAAGTCCGGCTCTGAACCCGTCAAGAGTAAACGGAGATGGAGATTCATCAGACACAGCAAAGACAAATCCCAAAGTGCTACTTCTGATCTCAATCACATCGACCTTTCCACATCTTCGCTTCCATACAGTGATTCCTTGAACGCTAATAAACGTGCCATTGCAGTGGCTGCGGCGACGGCGGCCGTCGCGGAGGCCGCTCTAGCCGCCGCTCATGCAGCGGCGGAGGTGGTTCGACTCACGAATGGCGGAGGCGGAGGCGGAGGCGGTCCTGGTACAAGCCAGCACCGGTGGCCGGAAGAGATCGCTGCCGTTAAGATACAGTCGGCGTTTCGTGGTTACTTGGCAAAGAGAGCTCTGAGAGCACTAAAAGCATTGGTGAAGTTGCAAGCATTGGTAAGAGGTCACATTGTAAGAAAGCAAACTGCAGATATGCTGAGGCGCATGCAAACTTTGGTGAGGCTGCAGTCCCGTGCTCGTGCAGGTCGCGTGCAGTTGTCCCCTATCCTCCATTCTACCAAGTCTCCTCTCTCTCATCATCCTGTCCCTGAACATTATGAAACATCACTTAGATCCAATAGTACTAAATTTGAAGGATCCCCTCTCCTCAAGAGATGCAGTTCGAATGCAAATTATAGGGATATTGGCTCCGGGAGATCGAGGATTGTATCGCAATGGTACGACCAATGGATGGAAGAAAATGTTTGGAACAATCCCAGAGGAGAAGATGACGAGAAGAGTGACAAAATTCTCGAAGTTGATACATGGAAGCCACACCTGAACTCCCATCAGAACGAGAATCCTTTGGCATATGGGTCTCCATCAAAGCGTTCAACAAGAAGTTTAAACCAAAGTCTCTTCTTCAGTTCCCTCAAGTTTCAGAAGAGAAAACAAGAGAAAGCTTCAACGAACAACAGCAAAGAACTGTCATCATCAACACATTCATATCAGAACAGTCCATCAGAGTCATTTTCTGCTTCAAGGAGAAGATCGGGTGCTTTCACGCCCACAAGAAGTGAGTGTGGCTACTTTGGTCACCCAAATTACATGGCCAACACTGAGTCATCTCGAGCCAAAGCTAGATCAGTGAGTGCCCCAAGGCAAAGGCTTTGGGATTCTGCAGGGAATAATTCTGATAGGCATAATGCTGATTTCGGAACCCAATGTTTTACTTCTTCAAGCCGCTTCAACAGAGTCTTGAGTACCCATCTAAGGTGA 1278 0.489 MGFLRRIFGGKKPASPSGASHKSGSEPVKSKRRWRFIRHSKDKSQSATSDLNHIDLSTSSLPYSDSLNANKRAIAVAAATAAVAEAALAAAHAAAEVVRLTNGGGGGGGGPGTSQHRWPEEIAAVKIQSAFRGYLAKRALRALKALVKLQALVRGHIVRKQTADMLRRMQTLVRLQSRARAGRVQLSPILHSTKSPLSHHPVPEHYETSLRSNSTKFEGSPLLKRCSSNANYRDIGSGRSRIVSQWYDQWMEENVWNNPRGEDDEKSDKILEVDTWKPHLNSHQNENPLAYGSPSKRSTRSLNQSLFFSSLKFQKRKQEKASTNNSKELSSSTHSYQNSPSESFSASRRRSGAFTPTRSECGYFGHPNYMANTESSRAKARSVSAPRQRLWDSAGNNSDRHNADFGTQCFTSSSRFNRVLSTHLR 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele48g1216 425 MobiDBLite consensus disorder prediction 324 354 - -
Lele48g1216 425 ProSiteProfiles IQ motif profile. 144 171 IPR000048 GO:0005515
Lele48g1216 425 MobiDBLite consensus disorder prediction 1 33 - -
Lele48g1216 425 MobiDBLite consensus disorder prediction 374 398 - -
Lele48g1216 425 ProSiteProfiles IQ motif profile. 120 148 IPR000048 GO:0005515
Lele48g1216 425 MobiDBLite consensus disorder prediction 276 298 - -
Lele48g1216 425 Pfam IQ calmodulin-binding motif 144 161 IPR000048 GO:0005515
Lele48g1216 425 Pfam IQ calmodulin-binding motif 123 141 IPR000048 GO:0005515
Lele48g1216 425 MobiDBLite consensus disorder prediction 317 359 - -
Lele48g1216 425 Pfam Protein of unknown function (DUF4005) 330 397 IPR025064 -
Lele48g1216 425 Gene3D - 120 171 - -
Lele48g1216 425 MobiDBLite consensus disorder prediction 278 298 - -
Lele48g1216 425 PANTHER IQ-DOMAIN 5-RELATED 28 401 - -
Lele48g1216 425 SMART iq_5 119 141 IPR000048 GO:0005515
Lele48g1216 425 SMART iq_5 142 163 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele48g1216 Lele-ChrLele48 16570639 16573034 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele48g1216 1 392 IQD Protein Family AT5G07240 44.928 6.28e-59 197