Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele48g1214 ATGCAGAAAAGGAAAATGGATCATCAGGAACGTAATGTTGAGATGAGTCTTCTTGGGGAAACCTTCGATCCGAGTTTGATTGCAATAATTAGGGATGATGGATATGAGAGCCGTTCTGGGAGTGATAATTTAGATGGCATCTCAGGCGAAGATGATCAAGATATTGCTGGTGATGATAACACACCTAATCAGAGATCCAACAAGAAGTACCATCGACACACTCCTCACCAAATTCAAGAGCTTGAAACACCAGAATGTGAATTCCTTGAATTGTGTTGGTGCATTAATGAAGATTTTGTCTGTTTAATTTTGAAATTTATTTACCAGACTCAACTGGAGCGGCATGAGAATCTGATTCTGAGGCAAGAAAATGACAAGCTGCGAGCAGAGAACAGTATGATGAAGGAAGCCATGACGAACCCAATATGCAACAACTGTGGAAGCCCTGCGATTCCTGGTCAAATCTCATTTGAAGAACACCAACTAAGGATTGAGAATGCTCGATTGAAGGATGAACTGGATCGCATACGTGCCTTGTCCAACAAGTTTCTGGGAAGGCCAATCTCAACCATGGCTCTTCCAAGCTCAAATTCTAGTCTTGAACTGGCCATTGGAACGAATAATAGTAATACTTTCAGTGGGATTAGTGGGATCCTTGTCGGGTCGAGTTTTCCGATGGGTATTGATATGGGGATGACGATGCAAATAGGGAATGATCAAGCACAGGCTGAGAGATCTATGCTTATAAACCTTGCATTGTCTGCTATGGAGGAATTGATGAAGATGGCTCAAGGAGATAATGGTCCTCTTTGGATTAGGACGTTGGATGGCGAAAATGAAGTTCTGAATCTTGAGGAGTATGTTCGGATTATTCCTCCTTGTCTTGGCCCAAAACCTCCTGGTTATGTCACTGAAGCTACTAGGGACACTAGAATTGTGATTATCAACACTTTAAATCTCATTGAAACATTGATGGACCCGAATCGATGGGTGGAGCTGTTTCCAGGCATGATTGCTAGAGCTGTGCCGCTGGATATGATATCAAGTGGCGTGGGGGGCACCAGAAGCGGGACTTTGCTTCTGCTGGAAGCTGAAATGCAGATGCCGTCGCCACTGGTGCCTGTTAGGCAAACGAGGTTGCTGAGATTATGCAAGCAGCAAGCAGAAAATCTTTGGGCGGTGGTTGATGTATCGATGGAGATAGGTCGTTACCCCACCAATGCTCACACTTTCGTCACATGCAGGAGGCTTCCTTCTGGCTGCCTTGTGCAAGATATGCCCAACGGTTGCTCCAAGGTTACTTGGGTAGAGCATTGGCAGTACGATGAGAACGTGCTGCACCCACTTTACCGTCCGATGGTGAACGCCGGAATGGGCTTCGGTGCTCATAGATGGACCTCCACCCTCCAAAGGCAATGCGAATGCTTGGCCATCCTCTTGTCCTCTACCATCCCTACTGACGATCACGCCACACTGAGCCAAGGTGGTCGACGAAGCATGGTGAAGCTGGCACAACGCATGGTGGACAACTTCTGTTACGGGGTCGTCCCTTCGTCGGCCCGGAGGTGGGAAAGCCTTCATGTGGGGACGCTAGGAGATGACGTCAAGATTATGACTCGGAGGAACGAAGGAGAACCAGGCTATCCTCCCGGAGTCATGCTCAGCGCCGCCACTTCCTTCTGGCTGCCTTTTTCACGGCAAGGGTTGTTCGACTTCCTCCGTGACGAACGCCGGAGATTCGAGTGGGACGTATTGTCCAATGGCAATGGAAACGTGCAGGAAGTGGCTGTCATTGCAAAAGGACAGACACATGGTAACTGTGTTTCTCTTCTTCGGACCAACGGTGTTAACGGGAACGAGACCGGCATGATGATACTGCAAGAGACATGGATGGATGCTACAGGATCAATGGTAGTTTATGCACCGGTTGATATGCAGTCGCTGAATGTGGTGATGAGTGGCGGCGATTCTTCGCACGTGGCTCTGTTGCCTTCAGGTTTTGCCATTCTTCCCGACGGGCCTAATAATGGCGGCCGCAACGGGAGTCCTCCGGGCGGTGACAGTGGGAGTGGTGGAAGCATACTTACAGTAGGGTTACAGATACTGATAAACAGCCTGCCATCATGGAAGCTGACGATGGAGTCCGTTGAAACTGTCAGCAATCTGATGACGACCACAGTGCAGAAGATCAAAGAGGCGGTGCGAGTTGTTGCATGA 2217 0.4858 MQKRKMDHQERNVEMSLLGETFDPSLIAIIRDDGYESRSGSDNLDGISGEDDQDIAGDDNTPNQRSNKKYHRHTPHQIQELETPECEFLELCWCINEDFVCLILKFIYQTQLERHENLILRQENDKLRAENSMMKEAMTNPICNNCGSPAIPGQISFEEHQLRIENARLKDELDRIRALSNKFLGRPISTMALPSSNSSLELAIGTNNSNTFSGISGILVGSSFPMGIDMGMTMQIGNDQAQAERSMLINLALSAMEELMKMAQGDNGPLWIRTLDGENEVLNLEEYVRIIPPCLGPKPPGYVTEATRDTRIVIINTLNLIETLMDPNRWVELFPGMIARAVPLDMISSGVGGTRSGTLLLLEAEMQMPSPLVPVRQTRLLRLCKQQAENLWAVVDVSMEIGRYPTNAHTFVTCRRLPSGCLVQDMPNGCSKVTWVEHWQYDENVLHPLYRPMVNAGMGFGAHRWTSTLQRQCECLAILLSSTIPTDDHATLSQGGRRSMVKLAQRMVDNFCYGVVPSSARRWESLHVGTLGDDVKIMTRRNEGEPGYPPGVMLSAATSFWLPFSRQGLFDFLRDERRRFEWDVLSNGNGNVQEVAVIAKGQTHGNCVSLLRTNGVNGNETGMMILQETWMDATGSMVVYAPVDMQSLNVVMSGGDSSHVALLPSGFAILPDGPNNGGRNGSPPGGDSGSGGSILTVGLQILINSLPSWKLTMESVETVSNLMTTTVQKIKEAVRVVA 738
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele48g1214 738 CDD START_ArGLABRA2_like 245 474 - -
Lele48g1214 738 SUPERFAMILY Bet v1-like 496 731 - -
Lele48g1214 738 Coils Coil 112 140 - -
Lele48g1214 738 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 66 734 IPR042160 -
Lele48g1214 738 MobiDBLite consensus disorder prediction 35 77 - -
Lele48g1214 738 ProSiteProfiles START domain profile. 241 478 IPR002913 GO:0008289
Lele48g1214 738 SMART START_1 250 475 IPR002913 GO:0008289
Lele48g1214 738 Coils Coil 159 182 - -
Lele48g1214 738 Pfam START domain 251 475 IPR002913 GO:0008289
Lele48g1214 738 SUPERFAMILY Bet v1-like 243 475 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele48g1214 Lele-ChrLele48 16551988 16555360 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele48g1214 10 734 Homeobox Transcription Factor Family AT3G61150 50.526 0.0 699