Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele48g1195 ATGGGGAGGGCACCATGTTGCGATAAAGATGGAGTGAAAAAGGGAGCTTGGACTCCGGAAGAAGATGAAATCTTAGTTCAGTACATCAAGAAGCATGGCTGTGGTCTACTTCGATGCGGGAAAAGTTGTCGGCTTCGGTGGATAAACTATCTTCGCCCTGACATCAAGCGTGGCCCTTTTACTAGTGAAGAAGAAGGTAAAATTACTCAACTTCATGGCATGCTCGGAAAAAGGTGGGCTGCTATAGCATCTCATTTACCAGGAAGAACAGACAATGAAATTAAGAACTATTGGAACACCCATCTGAAGAAGCGTTTCATTCACTCAGGTCATTCTCTGGAGGCACAAGAGCCCTCTTTTGGTCCTCATCATCATCAAAGTGATATGAAATATGAATCTTCTGTGAGTCATGTAATCCAGTGGGAGAATGCCAGAGTTGAGGCAGAAAAAAGGTTGTCAATGGAAATGGAATCCTCATGTCTTAATCATTGTTCCCAAACTAACACACATTCAGACTGCTTTCTTCGACTTTGGCACTCCGAGGTAGGACAATCATTTCGCATGATCAAGGAAAAGAAAGCGGAAAGCGAAAGCCCTACCTCGCAAGCAAGCAGTGGCTTTGCCAGCATGGCTCAAGAACAAGCAAGCAGCTGCAATCCAAAGCTTGAAGAAGGCACAGCTGGGTCAGACTCAGGTTCTCATGAATTTCTTGATGCCTCTGATTCTGCATTGAAGCTCCTGCTAGATATGCCTGATAACAATGTGGGATTCTTTGAAGGCCTGGAACAGACCGAGAATTTCCAGAGTCCTCAGCATGATAGATATGACTAA 831 0.4465 MGRAPCCDKDGVKKGAWTPEEDEILVQYIKKHGCGLLRCGKSCRLRWINYLRPDIKRGPFTSEEEGKITQLHGMLGKRWAAIASHLPGRTDNEIKNYWNTHLKKRFIHSGHSLEAQEPSFGPHHHQSDMKYESSVSHVIQWENARVEAEKRLSMEMESSCLNHCSQTNTHSDCFLRLWHSEVGQSFRMIKEKKAESESPTSQASSGFASMAQEQASSCNPKLEEGTAGSDSGSHEFLDASDSALKLLLDMPDNNVGFFEGLEQTENFQSPQHDRYD 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele48g1195 276 MobiDBLite consensus disorder prediction 198 226 - -
Lele48g1195 276 CDD SANT 16 102 IPR001005 -
Lele48g1195 276 Gene3D - 13 56 - -
Lele48g1195 276 SUPERFAMILY Homeodomain-like 11 98 IPR009057 -
Lele48g1195 276 Pfam Myb-like DNA-binding domain 14 51 IPR001005 -
Lele48g1195 276 Pfam Myb-like DNA-binding domain 57 102 IPR001005 -
Lele48g1195 276 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 208 - -
Lele48g1195 276 MobiDBLite consensus disorder prediction 191 235 - -
Lele48g1195 276 Gene3D - 59 105 - -
Lele48g1195 276 ProSiteProfiles Myb-like domain profile. 9 102 IPR001005 -
Lele48g1195 276 SMART sant 13 53 IPR001005 -
Lele48g1195 276 SMART sant 56 104 IPR001005 -
Lele48g1195 276 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 52 106 IPR017930 -
Lele48g1195 276 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 51 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele48g1195 Lele-ChrLele48 16429753 16431679 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele48g1195 1 259 MYB Transcription Factor Family AT3G61250 49.822 1.18e-83 251
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele48g1195 Myb_DNA-binding 6.2e-14 CL0123