Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele48g1194 ATGGAAGATAAGAGAAGGGAAGGGGGCACTATCCGATGGCTGATGGGTCATCATCTGACTCAACTGTTTAAGATTGGAATCTGTTCACTTTCTGGGTATTGCTGCCATTGTTATGGTCTTGGTTTGGACCATTCATTATCTTGGTGGCTTAGCTTGGAACTCTTCGGACAAGAGCCTCCTTTTCAATGTAACTTAGCTTTTATCATAAGTTACAAAGCTCTTGTTTTGGAGAAAGACGTGAAGAAAGTGATCCACCTGGGGCTTCATGCCATTGCATTAGTGCTTGGAATAGTGGGGACTTACGCTGTGTTCTTGTTTCCTAAAGAGAAAGACATTGCTAATCTCTACAGCTTTTATTCCTGGCTCAGAATTGCAGCTATTATTCTCTACGGCGTTCAGGTTTTAGGATATATGAGTTTCAAACTAGTGAATCAGGTCATGGTGTTATGTAATTTCAGTGGATATGTGGCAGTTCTTGGATTTCTGGAGAAGCTGACATTCCTTGAGAAGAGTGGTCTGGCTAACTTTGGATCTGAGGCCTACCTCGTCAACTTCACCAATGTCGTTACCCTCTTGTTTGCTGCCCTGGTTGTCTTCTTGCTATCGCCGGGCCCCCTACTCCTGCATTGGGTGACTATGCTCCTATTTAGTAAGGAAAGATCAACGGAACGGGAAAGGAAAAGGAAAAGCATGACAGAGGAACAACCCAAAACGCTGGAGGTTGAATCCCCGTCGGAACCTCCGCCACCACCACCCCATAAAGCGACTCTACCACCACAACCACCACCACCTCATGAGGAGCTTCCCCCGCCACTGCCGCCGCCACCATCGCATGAGGAGCCTACAAAAGATGTGACTGAGGAGAAATCTGTAACTCCACCACCTCCTTCTGATGACCTCAAGGCTCTTGCTATTGTTGAGAAGCCTCAAGAAGCTTCTGAAGAGAAACCGTCTGAAGGTTCTGCAAAGAGAGATGCAGTGCTGGCTAGAGTTGCCACAGAGAAGAGGCTTTCACTGATAAAAGCATGGGAAGAAAGTGAAAAATCAAAAGCAGAGAACAAAGCACACAAGAAGTTATCAGCTATTTCAACATGGGAGAACTGTAAGAAAGCAGCCATTGAAGCTGAATTAAGAAAGATTGAAGAACAACTGGAAAAGAAGAAGGCAGAGTATGTGGAGAAAATGAAGAACAAAATAGCTATTATCCACAAGGAGGGTGAAGAGAAGAGGGCAATTATTGATGCCAAGAAAGGGGAAGATCTTCTTAAGGCAGAGGAAGCAGCTGCAAAATACAGGGCCACTGGAACAGCTCCAAAGAAGATCTTTGGCTGTTTCTGA 1338 0.4522 MEDKRREGGTIRWLMGHHLTQLFKIGICSLSGYCCHCYGLGLDHSLSWWLSLELFGQEPPFQCNLAFIISYKALVLEKDVKKVIHLGLHAIALVLGIVGTYAVFLFPKEKDIANLYSFYSWLRIAAIILYGVQVLGYMSFKLVNQVMVLCNFSGYVAVLGFLEKLTFLEKSGLANFGSEAYLVNFTNVVTLLFAALVVFLLSPGPLLLHWVTMLLFSKERSTERERKRKSMTEEQPKTLEVESPSEPPPPPPHKATLPPQPPPPHEELPPPLPPPPSHEEPTKDVTEEKSVTPPPPSDDLKALAIVEKPQEASEEKPSEGSAKRDAVLARVATEKRLSLIKAWEESEKSKAENKAHKKLSAISTWENCKKAAIEAELRKIEEQLEKKKAEYVEKMKNKIAIIHKEGEEKRAIIDAKKGEDLLKAEEAAAKYRATGTAPKKIFGCF 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele48g1194 445 MobiDBLite consensus disorder prediction 222 240 - -
Lele48g1194 445 Pfam Remorin, C-terminal region 335 440 IPR005516 -
Lele48g1194 445 Pfam Remorin, N-terminal region 282 331 IPR005518 -
Lele48g1194 445 PANTHER OS02G0117200 PROTEIN 231 445 - -
Lele48g1194 445 MobiDBLite consensus disorder prediction 242 279 - -
Lele48g1194 445 SMART 561_7 60 161 IPR006593 -
Lele48g1194 445 Coils Coil 370 397 - -
Lele48g1194 445 Pfam Eukaryotic cytochrome b561 68 139 IPR006593 -
Lele48g1194 445 Gene3D - 17 204 - -
Lele48g1194 445 MobiDBLite consensus disorder prediction 222 300 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele48g1194 Lele-ChrLele48 16420203 16428834 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele48g1194 68 198 Chloroplast and Mitochondria Gene Families AT4G25570 48.026 1.17e-29 115