Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele48g1187 ATGGCAGTTATAGTCCCCAAGAAATGGGGGATGTTTGGATTCTGGTGCTGTGTTTTGTCCATCGCAGTTTGTGCGAGGGTTTGTGCTCCCGCCAGATCGGAGAAGGAAGTACGAGAAAGGTTCTATGGGAGTATGCCGAACTCATCTTCATCGGATTCTGGTGATGGCAGCTTGGCTAAAATGTTCGATCGTGTCCTTGAGAAAGAATTTTCCGAGAATGACCAGCCTGAAGGATCTGATAAGAGTAGCTTCAACAGTACTGTAGCTGATCAACAGGCTGTACTGGAGACTGTAGCTAAAATTACTCATGATAAAGGCAATAGAAATGATACTCAGGAGGGAAATGGTACCAGATCATTTCAATTTCAAGATGTGTTCTCCCTGGAGAATGAAGATTCTGATGATTCAACAACCTTGATTGACAGAAAGGACAATGTTTTTGTGATGTCAAACAAGAAATCCAAATACCCAGTACTTCAGTTAGATTTAAGGCTAATATCAGATTTGGTGGTTGTGATAGTTTCTGCGGCCATTGGTGGAATTCTCTTTTCCTGTTTGGGCCAACCGGTCATTGTGGGCTATCTCCTTGCCGGCTCCCTTATTGGACCTGGGGGATTGAATTTTATTAGTGAAATGGTACAGGTTGAAACTGTTGCACAGTTTGGGGTTGTTTTTCTTCTGTTTGCTCTGGGGCTGGAATTCTCTTTGTCAAAGTTAAAAGCTGTGGGGCCTGTTGCTGTTTTGGGTGGACTGCTTCAAATTGTGACATTTATGTTCATGTGCGGCATTCTTACCATGTTATTTGGAGCCAAGTTGTCAGAAGGTGTATTTGTTGGTTCCTTTCTGTCCATGTCATCAACAGCAGTGGTAGTGAAATTTTTGGTGGAGCGGAACATAAATAATTCTCTTCATGGTCAAGTGACAATTGGAACTCTTATTTTTCAGGATTGTGCAGTGGGTTTACTCTTTGCTTTGCTCCCAGTTTTGGGTGGTACCAGTGGTCTTTTACAAGGAATACTTTCAATGGGAAAGTTGTTGCTAGTATTGTCCATGTATCTCACAGTGATATCTATATTGTGTTGGTCGTTTGTTCCCTTCTTTCTAAAACTGATGATGCAGCTGTCATCTCAGACAAATGAACTTTATCAGCTGGCTGCTGTGGCATTCTGCTTACTATCAGCATGGGGCAGTGACAAGCTTGGCCTTAGCCTTGAGCTGGGTTCATTTGTTGCTGGTGTTATGATTTCAACCACAGACTTTGCACAGCATACTTTGGACCAGGTGGAACCAATTCGTAACCTGTTTGCAGCTCTCTTCCTCTCAAGTATTGGAATGCTCATACATGTGCATTTCCTATGGAACCATGTAGATATCTTGCTGGCATCTGTTATCCTTGTTATAGTTGTTAAGACTGCTGTTGCTGCTGTTGTTACTAAAGCCTTTGGTTATAGTATTCGGACATCATTTCTGGTTGGGACTTCACTTGCTCAGATTGGAGAGTTTGCCTTTGTTCTCCTCAGCCGTGCTTCAAATCTTCATCTTGTTGAGGGGAAAATGTATCTTCTTCTCCTTGGGACGACAGCTCTTAGTCTGGTTACAACCCCTCTATTGTTCAAATTGATACCTGCTGTCATGAATCTTGGTGTTCTGATGCACTGGTTCCCCCCAGAGAGTAATGGACGAACCGCTGCACAGAATGAGGAGAAAGCTTCCATGATTGAAGTGAAAGGAACGTTGTGA 1740 0.4299 MAVIVPKKWGMFGFWCCVLSIAVCARVCAPARSEKEVRERFYGSMPNSSSSDSGDGSLAKMFDRVLEKEFSENDQPEGSDKSSFNSTVADQQAVLETVAKITHDKGNRNDTQEGNGTRSFQFQDVFSLENEDSDDSTTLIDRKDNVFVMSNKKSKYPVLQLDLRLISDLVVVIVSAAIGGILFSCLGQPVIVGYLLAGSLIGPGGLNFISEMVQVETVAQFGVVFLLFALGLEFSLSKLKAVGPVAVLGGLLQIVTFMFMCGILTMLFGAKLSEGVFVGSFLSMSSTAVVVKFLVERNINNSLHGQVTIGTLIFQDCAVGLLFALLPVLGGTSGLLQGILSMGKLLLVLSMYLTVISILCWSFVPFFLKLMMQLSSQTNELYQLAAVAFCLLSAWGSDKLGLSLELGSFVAGVMISTTDFAQHTLDQVEPIRNLFAALFLSSIGMLIHVHFLWNHVDILLASVILVIVVKTAVAAVVTKAFGYSIRTSFLVGTSLAQIGEFAFVLLSRASNLHLVEGKMYLLLLGTTALSLVTTPLLFKLIPAVMNLGVLMHWFPPESNGRTAAQNEEKASMIEVKGTL 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele48g1187 579 Gene3D - 163 546 IPR038770 -
Lele48g1187 579 MobiDBLite consensus disorder prediction 560 579 - -
Lele48g1187 579 PANTHER POTASSIUM/PROTON ANTIPORTER-RELATED 18 573 IPR045158 GO:0015386|GO:0071805|GO:1902600
Lele48g1187 579 Pfam Sodium/hydrogen exchanger family 170 539 IPR006153 GO:0006812|GO:0015299|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele48g1187 Lele-ChrLele48 16375961 16382828 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele48g1187 31 576 Antiporters AT5G51710 82.418 0.0 907
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele45g0262 45 2122400 2129246 Lele48g1187 48 16375961 16382828 hybridization
Lele46g0285 46 1855592 1862634 Lele48g1187 48 16375961 16382828 hybridization