Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele48g1151 ATGGATTACTCCGTAATGAGCTGCCCCTTTATTGAACCTGTTGTTAGGAACATTGTGAACCAAGCTTTGCAGGATGATCCAAACCTAGCAGCTGGTCTTATTAGAATGCACTTCCATGACTGCTTCATTCAGAGACTAAAATGTTCCCCACCAGGAGCTCACACACTAGGAGTAGCAAGGTGTGCGTCATTCAAGAACCGAATAAGTGGCCAAGCAGATCCCACGTCGGTGGACTCAGAATTCGCGGCCTCACTGTCCAAAACTTGCAGCGGCGGCGACAACGCCGAGCAGGCTTTCGACACCACCAAGAATGTCTTCGACAACTTGTACTTCGACGCCTTGACCAGGAACAACGGCCTCCTGACCTCCGAGCAGACGCTGTACACCCATCCAGATACCAAGAACTTCGTCAACGCCTATGCGTTTAACCAGGCCATGTTCTTCTTCGATTTCCAACAAGCTATGGTGAAGATGGGTAAGCTTGACGTCAAACAAGGTTCCAATGGCCAAGTTCGAGCCAACTGTCGGGAAATCAACTGA 540 0.4981 MDYSVMSCPFIEPVVRNIVNQALQDDPNLAAGLIRMHFHDCFIQRLKCSPPGAHTLGVARCASFKNRISGQADPTSVDSEFAASLSKTCSGGDNAEQAFDTTKNVFDNLYFDALTRNNGLLTSEQTLYTHPDTKNFVNAYAFNQAMFFFDFQQAMVKMGKLDVKQGSNGQVRANCREIN 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele48g1151 179 PANTHER PEROXIDASE 72-RELATED 6 44 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele48g1151 179 ProSiteProfiles Plant heme peroxidase family profile. 3 44 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele48g1151 179 Gene3D - 160 176 - -
Lele48g1151 179 ProSiteProfiles Plant heme peroxidase family profile. 46 179 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele48g1151 179 PRINTS Haem peroxidase superfamily signature 30 44 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele48g1151 179 PRINTS Haem peroxidase superfamily signature 99 114 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele48g1151 179 Gene3D - 6 44 - -
Lele48g1151 179 Gene3D Peroxidase, domain 2 52 159 - -
Lele48g1151 179 SUPERFAMILY Heme-dependent peroxidases 7 179 IPR010255 GO:0004601|GO:0006979|GO:0020037
Lele48g1151 179 PRINTS Plant peroxidase signature 8 27 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele48g1151 179 PRINTS Plant peroxidase signature 32 52 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele48g1151 179 ProSitePatterns Peroxidases active site signature. 30 41 IPR019794 GO:0004601
Lele48g1151 179 FunFam Peroxidase 50 158 - -
Lele48g1151 179 Pfam Peroxidase 52 141 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele48g1151 Lele-ChrLele48 16132983 16134446 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele48g1151 1 44 Peroxidase AT4G33420 70.455 2.35e-15 70.9