Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele48g1132 ATGGAGATAGAGGCGAGCAGGGCGGTCGGGAATCATGGGACGACGGAGATTCCGGCGCTGAGTCCTCTCAGCGAGACGCTGTGGAGGGATACTAAGGCCAACGTCGACTTCGTCGGTGATGTGTCGGCTAGGCTTACCTGGAAGGATCTCACCGTCATGGTCACTCTTGGCAACGGAGAGACCCAGAACGTTCTCGAAGGTCTCACCGGCTACGCCGAGCCCGGCACCTTCACGGCCCTCATGGGCCCCTCCGGCTCCGGCAAGTCCACTCTCCTCGACGCCCTCTCTAGCCGTCTCGCTGCTAATGCCTTCCTCTCCGGATCCATCCTCCTCAATGGTCGAAAAGCCAAGCTCTCTTTCGGAACAGCTGCGTATGTGACGCAAGACGACAACCTCATTGGAACTTTGACGGTTCGAGAAACGATATCTTATTCGGCTCGTCTGAGGCTGCCGGATAAGATGCCCTGGTCGGACAAGCGAGCTCTGGTGGAGAGCACAATAATAGCCATGGGGCTTCAGGATTGTGCCGACACGGTGATCGGAAACTGGCATCTCCGGGGAATCAGTGGCGGAGAGAAGAGAAGAGTTAGCATCGCTTTGGAGATCTTGATGAGGCCCAGGTTGCTGTTTCTTGATGAACCTACCAGTGGACTCGACAGTGCTTCGGCTTTCTTTGTGACTCAAACACTAAGAGCCCTTGCAAGGGATGGTAGAACAGTGATAGCTTCAATTCACCAACCAAGCAGTGAAGTGTTTGAACTATTTGACCAATTGTACCTTCTTTCTGGCGGCAAAACTGTTTATTTTGGCCAAGCTTCTGAAGCGTACGAGTTCTTTGCACAAGCTGGCTTTCCTTGCCCTGCTTTGAGGAACCCTTCTGATCATTTCCTTAGATGCATCAACTCTGACTTTGACAAAGTCAAGGCCACTCTCAAAGGCTCCATGAAACTCAGGTTTGAAGGAAGTGATGATCCTCTGGACAAGATAACTACAGCTGAAGCTATCCGGACTCTGATAGGTTATTATCGGACTTCTCAGTACTCTTATGCTGCAACACAGAAAGTGGATGAGATTTCTAAAGTGAAAGGAACAGTGCTGGATTCAGGAGGAAGTCAGGCGAGTTTCTTCATGCAGGCATTTACATTAACAAAGAGATCGTTCATCAACATGTCAAGGGATTTTGGATACTACTGGCTTCGTCTTGTCATCTACATTGTTGTCACTGTTTGCATCGGAACCATCTATCTCAACGTTGGAACTGGCTACAACTCCATTCTGGCAAGAGGTTCGTGTGCATCGTTTGTGTTTGGGTTTGTGACATTCATGTCAATTGGAGGGTTCCCTTCGTTTGTGGAAGATATGAAGGTATTCCAAAGGGAGAGGTTGAATGGACACTATGGGGTGGTATCTTTTGTGATAAGCAACACATTATCTGCAATGCCGTTTCTGATACTCATAACGTTTCTGTCTGGAACCATATGTTACTTCATGGTTCGTCTCCACCCTGGCTTCTGGCACTATATCTTCTTCGTCTTGTGCCTCTATGCCAGTGTCACTGTCGTTGAGAGCTTGATGATGGCCATTGCTAGTATTGTCCCCAACTTCCTCATGGGTATCATCATTGGTGCTGGCATTCAGGGCATATTCATGTTGGTGTCTGGCTACTTCAGGCTCCCACATGACATACCAAAGCCATTCTGGCGCTACCCAATGTCTTATATCAGTTTCCACTTCTGGGCATTACAGGGTCAATACCAGAATGATCTGAAAGGGTTGATCTTCCACAACCAGACGCCGGATCTTCCGAAGATTCCGGGGGAGTACATTCTGGAGAACGTGTTCCAGATTGATGTAAACAGATCGAAGTGGATTGATTTGATAGTGATATTCAGCATGATCATCATATACCGAATCATCTTCTTCATAATGATCAAGATCAACGAGGATGTGACTCCATGGGTGAGAGGTTACATTGCCAGGAGAAGAATGCAGCAGAAGAGTACAACACAGAACACCACCATTGCTCCTGATGTTCTCACTCAATCTCCTTCTCTAAGAACCTATATCACAAGCCAATCCAGTTCTGCTGCTCGGAAAAGGTAA 2103 0.4826 MEIEASRAVGNHGTTEIPALSPLSETLWRDTKANVDFVGDVSARLTWKDLTVMVTLGNGETQNVLEGLTGYAEPGTFTALMGPSGSGKSTLLDALSSRLAANAFLSGSILLNGRKAKLSFGTAAYVTQDDNLIGTLTVRETISYSARLRLPDKMPWSDKRALVESTIIAMGLQDCADTVIGNWHLRGISGGEKRRVSIALEILMRPRLLFLDEPTSGLDSASAFFVTQTLRALARDGRTVIASIHQPSSEVFELFDQLYLLSGGKTVYFGQASEAYEFFAQAGFPCPALRNPSDHFLRCINSDFDKVKATLKGSMKLRFEGSDDPLDKITTAEAIRTLIGYYRTSQYSYAATQKVDEISKVKGTVLDSGGSQASFFMQAFTLTKRSFINMSRDFGYYWLRLVIYIVVTVCIGTIYLNVGTGYNSILARGSCASFVFGFVTFMSIGGFPSFVEDMKVFQRERLNGHYGVVSFVISNTLSAMPFLILITFLSGTICYFMVRLHPGFWHYIFFVLCLYASVTVVESLMMAIASIVPNFLMGIIIGAGIQGIFMLVSGYFRLPHDIPKPFWRYPMSYISFHFWALQGQYQNDLKGLIFHNQTPDLPKIPGEYILENVFQIDVNRSKWIDLIVIFSMIIIYRIIFFIMIKINEDVTPWVRGYIARRRMQQKSTTQNTTIAPDVLTQSPSLRTYITSQSSSAARKR 700
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele48g1132 700 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 45 282 IPR027417 -
Lele48g1132 700 Pfam ABC transporter 67 216 IPR003439 GO:0005524
Lele48g1132 700 Pfam ABC-2 type transporter 378 584 IPR013525 GO:0016020|GO:0140359
Lele48g1132 700 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 45 288 IPR003439 GO:0005524
Lele48g1132 700 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 33 667 - -
Lele48g1132 700 CDD ABCG_EPDR 42 270 - -
Lele48g1132 700 FunFam ABC transporter G family member 11 39 282 - -
Lele48g1132 700 Gene3D - 39 283 IPR027417 -
Lele48g1132 700 SMART AAA_5 74 245 IPR003593 -
Lele48g1132 700 ProSitePatterns ABC transporters family signature. 188 202 IPR017871 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele48g1132 Lele-ChrLele48 15954287 15959124 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele48g1132 75 276 Calmodulin-binding Proteins AT2G36910 31.455 1.50e-11 66.2