Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele48g1124 ATGTTCTCCCTGTCTCCTAGAGCTGCAAATTTAGCAGATTCTACCCCTGCATCAGTACCCTTACCTCGTCGTGTTGAGCAAAAACCGAAGAGCGGGATAAGGCAGCAAGATCTGCTGAAGAAAGTTGTGGAAATTAAGCCAAAGAGACCGAAGGCCTTTAATGGTGGAAAACTACTAATCCTCCTTGTAGCTTCAGTACAGGCTGTTTTTTCCTTCCCTTATGGTTATCATTTTGCTTGTCTTTTCCACCGTGCTAATGGTTTACTCTGCATTTGGATGGTTGGCGCATCCACAATTTGTTTTGATGGCCCTGTTTTTGTTGTTGCAAAAGTCATTTTTTTGGGTGATTTACTTCTGCTGAGTGGAGTTGTTCAATTTCAATGTTCTTCAACCTCCATACCTTTTGGTTTGGAGCTTGATACGCCTCCTCCTTCATTCCTGATTCTTACACTGAAATACCAACCCCTCAATTCATCACCTGCAAAGGCCATATTTCCTCGAATATTTGGCCATGAATCGTCAGGGATTGTTGAGAGTGTAGGCGAGGGGGTGACTGAATTAAAGGAGGGAGACCATGTGCTAACTGTGTTCATTGGAGAATGCATGACATGCAGGATGTGCAAATCTGGAAAAATAAACATGTCAATTAAAGTCAGCCCAAATGCTCCTCTTGAGAAAACATGCCTTTTGATCCGTGGTGTTGCTGCTGGTAATTGTTCTAAAATATGCCTTTTGATCTGTGGTGTTGCTACTGGTCTGGGCGCTGCATGGAATGTTGCTAATGTATCAGAAGGATTTGCAGTGGTGATATTTGGACTTGGAACTGTTGGCCTTTCTGTTGCACAAGGTGCTAAAGTTAGGGGGGCACCTCGAATAATCGGTGTGGACAACAACCCTCAGAATTGTGAAAATGCTAAAGCTTTTGGAGTTACAGAAGTTGTTAACCCAAATTCCTTTGACGAACGTATCGCTCGGGTTATTAAGCGCATTTACAATGGTGGAGCTGATTTCTCTTTTGAATGCATCGGTGATACCAATATGGTAACCACTGCATTGCAGTCATGCTGTGATGGATGGGGGTTTGACTGTTACCCTTGGTTTGCCAAAAGTGAAGCCTGA 1119 0.4343 MFSLSPRAANLADSTPASVPLPRRVEQKPKSGIRQQDLLKKVVEIKPKRPKAFNGGKLLILLVASVQAVFSFPYGYHFACLFHRANGLLCIWMVGASTICFDGPVFVVAKVIFLGDLLLLSGVVQFQCSSTSIPFGLELDTPPPSFLILTLKYQPLNSSPAKAIFPRIFGHESSGIVESVGEGVTELKEGDHVLTVFIGECMTCRMCKSGKINMSIKVSPNAPLEKTCLLIRGVAAGNCSKICLLICGVATGLGAAWNVANVSEGFAVVIFGLGTVGLSVAQGAKVRGAPRIIGVDNNPQNCENAKAFGVTEVVNPNSFDERIARVIKRIYNGGADFSFECIGDTNMVTTALQSCCDGWGFDCYPWFAKSEA 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele48g1124 372 Pfam Alcohol dehydrogenase GroES-like domain 161 215 IPR013154 -
Lele48g1124 372 Gene3D - 239 251 - -
Lele48g1124 372 SUPERFAMILY GroES-like 165 271 IPR011032 -
Lele48g1124 372 FunFam S-(hydroxymethyl)glutathione dehydrogenase 252 365 - -
Lele48g1124 372 Pfam Zinc-binding dehydrogenase 276 355 IPR013149 -
Lele48g1124 372 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 170 184 IPR002328 GO:0008270|GO:0016491
Lele48g1124 372 MobiDBLite consensus disorder prediction 1 33 - -
Lele48g1124 372 PANTHER ALCOHOL DEHYDROGENASE 160 217 - -
Lele48g1124 372 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 241 361 IPR036291 -
Lele48g1124 372 Gene3D - 252 360 - -
Lele48g1124 372 Gene3D - 162 215 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele48g1124 Lele-ChrLele48 15892957 15897880 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele48g1124 48 15892957 15897880 Lele48g1124 48 15892957 15897880 ECH
Lele45g0333 45 2692099 2695395 Lele48g1124 48 15892957 15897880 hybridization
Lele46g0358 46 2425498 2428048 Lele48g1124 48 15892957 15897880 hybridization