Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele48g1113 ATGCATCCTCCACCTTCTATAATACTAATTACTAAGCATTTAGGATCAGTTGCCAATATTAGACATCATTGCACTGCTATCTCAATTTTTGCTCAAGTAGAGTTCATGGGACATTCTTTATGCACACTAATTGTTACGCTATGTGGGTTTTCTGCCTGTAAAGAACTAAAGATGGATGAGTATCAAGAGATGGAGAGATTTGGTATGGATAATGATTTTGAAGGTGGTGAATGGATTGGTGGTGAGTTCTACTATCGAAAGCACAAAGAGAAACGCACTCAAACCAGAGAAGATGTTCTTTATGGGGTGTTTGCAGACTCTGATGATGATGAAGAGGATTATTCAAAAAGAAAACGTAGAAAAGATGACTTATCTAAGAAGCCTGACCTCACCAAGCCTGTGAATTTTGTCTCTACTGGAACCTTTATGCCTAATCAAGATGGTAACCGTTCTAAAGAACAGATTGAAGAAGAAAATTATACTAGTGAGGACAGGCCAGTTTTAGGTCTTGGCATGGGAACTACTAGCACTTCTAGTTCTGGGTTAGGTTTTAATACTATTCATCGTGAAAATGCTTCTGATGAAGATAATGGTGATGACGGTTTTCTGCCTACAGCATTTGGAAAGAAGATTAAGGAGGGAGCAATGCGAAGGGAGAGGGAAAAGGAGAGAGCAAAATTGGAAAAGAAGAGAGCTCAAGGAAAAGCTCAAGCTCAAGATGGATTTTCAGATGTTGGGAAGTTTGAGAAGCATACAAAGGGGATCGGAATGAAGTTGTTGGAGAAGATGGGTTATAAAGGAGGTGGTCTTGGGAAGAATGAACAAGGTATTGTTGCTCCTGTTGAGGCTCATTTGAGGGCCAAGAATACAGGCATTGGATTTAGTGACTCGAAGGGAACAACTCTTTTGTCAAGTGTTCAAGTTGAGAAGACCGCATTGCCTGGAGTTGCTCAACCTACAGCGGTTAGAGCAAAGGAAAGGTTGTGGTCAAAGCAATCAAGGTCAAAGAAGAAGAAAGATGAGGATGATTATATTACTGCTGAGGAATTGTTAGTAAGCAATCAAGAACAGGGTCTGGAGGTTGTTCAGAAGGTTTTTGATATGAGAGGGCCACAGGTCCGAGTAATTACGAATTTGTCTGATTTGAATGCCGAGGAGAAAGCTAAGGAAAATGATATTCCAATGCCAGAGCTTCAGCATAACGTGGGGTTAATTGTTAGGTTGGCTGAAGCAGACATCCAAGAAATTGATAGAAAATTGAGGGGAGAGAGGGAGACAGCACTCAGCTTGAAAAAAGAGAAAGAGAAGTTAGAAACTCAGGTAGCACACCAAAAAAAGCAGTTGCAAGATTTGGAGGAAATAGAAAGTGTGCTGGACCGAGTTGGAAAAGAGAATTCCATGGGGACATTGACATTGGATTTGCTTGCACAGTGCTTTGCTGACCTGCGGAAAAGATACGCTGATAGCTACAAGTTGTGTAACTTGTCATGTATTGCTTCCTCATATGCTTTGCCTTTGTTTATTAGAGTATTCCAAGGATGGGATCCTCTTCAAAATCCATCACATGGGTTAGAGTTGGTGTCACGGTGGAAAGCATTGCTTCAAGAAGAAGATTGCCTTGATATCTGGGATGTAACATCGCCTTATACTCAATTGATTTCTGAAGTTGTATTACCAGCTGTCAGGATTTCAGGTATCAATACTTGGCAGGCACGGGATCCGGAGCCCATGTTACGGTTTTTGGAGTCATGGGAAAAGTTGCTTCCTTCTTCAGTTCTCACAACCATGTTGGAGAATATAATCATGCCAAAATTGGCCAGTGCTGTAGATACATGGGAACCACATCGTGAGACAATTCCTATTCATACTTGGGTGCACCCATGGTTACCTTTGTTAGGACACAAGTTAGAGGGCATGTATCAGATGATACGCTTCAAATTGAGTACTGTTCTTGGTGCCTGGCACCCAAGCGATGGCTCTGCTCATGCTATATTGTCACCTTGGAAGACCGTATTTGATTCAGTGAGTTGGGAACAGCTTATGCTTCGATTTATTGTGCCAAAGTTGCAGCTTGTCCTGCAAGAGTTCCAAGTGAACCCAGCAGATCAGAAGCTTGATCAATTTTATTGGGTGATGAATTGGGCTTCTGCTGTCCCAATTCATCTGATGGTTGATATAATGGAAAAGTTCTTCTTCACCAAGTGGCTTCAGGTTTTGTATCATTGGTTGTGCTCTAACCCTAACTTTGAAGAAGTTACAAAATGGTACTTGGGCTGGAAAGAACTTATTCCAAAGGAACTTTTGGCTAATGAAAGTATTCGATATCAGTTAAACTGCGGTCTTGATATGATGAACCAGGCTGTTGAAGGTATGGAGGTGGTCCAACCTGGCTTGAAAGAAAATATCAGCTATCTTAGGGTACTTGAGCAAAGGCAGTTTGAGGCTCAGCAGAAAGCAGCAGCTCATGCTCAAACCCAAGCGCCTTCAGGCATGGGGAGTGCTGCCCATATGGATGGTGCCGCTGGCGTACATGAGATGAGCTTAAAGGAAGTCATTGAGGCCCATGCCCAACAACATGGTTTGCTATTCAAGCTTAAACCTGGCAGAATGCACAATGGTCATCAAATATATGGGTTTGGTAATGCCAGCATTATAATAGATTCTCTAAGTCAAAAGGTATATGCTCAAACTGAGGATGCGTGGGCTTTGGAATCTCTCCAAGGCTTACTGGAGCTGCATAATAAATCCCTTGGTCGGAGACGATGA 2766 0.4215 MHPPPSIILITKHLGSVANIRHHCTAISIFAQVEFMGHSLCTLIVTLCGFSACKELKMDEYQEMERFGMDNDFEGGEWIGGEFYYRKHKEKRTQTREDVLYGVFADSDDDEEDYSKRKRRKDDLSKKPDLTKPVNFVSTGTFMPNQDGNRSKEQIEEENYTSEDRPVLGLGMGTTSTSSSGLGFNTIHRENASDEDNGDDGFLPTAFGKKIKEGAMRREREKERAKLEKKRAQGKAQAQDGFSDVGKFEKHTKGIGMKLLEKMGYKGGGLGKNEQGIVAPVEAHLRAKNTGIGFSDSKGTTLLSSVQVEKTALPGVAQPTAVRAKERLWSKQSRSKKKKDEDDYITAEELLVSNQEQGLEVVQKVFDMRGPQVRVITNLSDLNAEEKAKENDIPMPELQHNVGLIVRLAEADIQEIDRKLRGERETALSLKKEKEKLETQVAHQKKQLQDLEEIESVLDRVGKENSMGTLTLDLLAQCFADLRKRYADSYKLCNLSCIASSYALPLFIRVFQGWDPLQNPSHGLELVSRWKALLQEEDCLDIWDVTSPYTQLISEVVLPAVRISGINTWQARDPEPMLRFLESWEKLLPSSVLTTMLENIIMPKLASAVDTWEPHRETIPIHTWVHPWLPLLGHKLEGMYQMIRFKLSTVLGAWHPSDGSAHAILSPWKTVFDSVSWEQLMLRFIVPKLQLVLQEFQVNPADQKLDQFYWVMNWASAVPIHLMVDIMEKFFFTKWLQVLYHWLCSNPNFEEVTKWYLGWKELIPKELLANESIRYQLNCGLDMMNQAVEGMEVVQPGLKENISYLRVLEQRQFEAQQKAAAHAQTQAPSGMGSAAHMDGAAGVHEMSLKEVIEAHAQQHGLLFKLKPGRMHNGHQIYGFGNASIIIDSLSQKVYAQTEDAWALESLQGLLELHNKSLGRRR 921
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele48g1113 921 MobiDBLite consensus disorder prediction 132 149 - -
Lele48g1113 921 MobiDBLite consensus disorder prediction 112 129 - -
Lele48g1113 921 Coils Coil 406 454 - -
Lele48g1113 921 ProSiteProfiles G-patch domain profile. 252 297 IPR000467 GO:0003676
Lele48g1113 921 SMART G-patch_5 250 295 IPR000467 GO:0003676
Lele48g1113 921 MobiDBLite consensus disorder prediction 112 169 - -
Lele48g1113 921 PANTHER TUFTELIN-INTERACTING PROTEIN 11-RELATED 58 908 IPR045211 GO:0000390
Lele48g1113 921 Pfam G-patch domain 252 293 IPR000467 GO:0003676
Lele48g1113 921 Coils Coil 215 237 - -
Lele48g1113 921 Pfam Tuftelin interacting protein N terminal 63 160 IPR022159 -
Lele48g1113 921 Pfam GC-rich sequence DNA-binding factor-like protein 473 739 IPR022783 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele48g1113 Lele-ChrLele48 15834216 15837815 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele48g1113 252 293 C2H2 Transcription Factor Family AT5G26610 47.619 3.14e-07 51.2