Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele48g1104 ATGGGCTCCTACTTTCCCAACCATGGAAATTTGGAAAACAAGAACTGTGGGCATACCTCTATCAAAATTGGGTCATCTTGTAGCTGTGCTTTTTCTAACAAGAGATTGCATGTATCTGCGAATTTCGTGTTAGGGCGCAGAAAGCTGCTTCTGTCTCTCGCCGCTTCGTCACTCGCTCTCTCCGCTCTACGGCTTTTAAATTTTGATTGTTCAAAGATGGCCGATGCACATGATACTGATAAGAACATTGAGGTGTGGAAGATCAAGAAATTGATCAAAGCCTTGGAGGCTGCCCGAGGAAATGGGACAAGCATGATTTCTCTTATCATGCCTCCACGTGATCAGATATCTCGTGTCACCAAGATGCTTGGTGACGAGTTTGGAACTGCGTCAAACATAAAAAGCAGAGTGAATAGGCAGTCTGTGCTTGGTGCAATCACTTCTGCTCAGCAGAGGCTTAAGCTTTATAACAGGGTTCCTCCAAATGGGCTTGTTCTGTATACTGGGACAATTGTCACAGAAGAGGGAAAGGAGAAGAAGGTGACCATGGATTTTGAGCCATTTAGACCTATCAATGCATCTCTCTATCTTTGTGACAACAAATTTCATACAGAAGCTCTCAATGAGCTTCTGGAATCTGATGACAAGTTTGGTTTTATAGTCATGGATGGGAATGGCACGCTTTTTGGGACCTTGAGTGGCAATACAAGAGAGGTGCTTCATAAATTTAGTGTGGATCTGCCGAAGAAGCATGGAAGAGGAGGTCAGTCAGCCCTACGATTTGCCCGTCTTCGGATGGAGAAGCGTCATAACTATGTGAGGAAGACTGCGGAGCTTGCTACACAATTTTATATTAATCCTGCTACCAGTCAGCCCAATGTTTCAGGATTGATTCTTGCTGGTTCAGCAGACTTCAAAACTGAGCTTAGCCAGTCAGATATGTTTGATCCTCGACTTCAGGCAAAAATACTTAATGTTGTTGATGTGTCCTATGGAGGGGAGAATGGCTTCAATCAGGCTATCGAACTATCATCAGAAATTCTGGCCAATGTGAAGTTCATCCAGGAGAAACGCTTGATTGGAAAATACTTTGAGGAGATTAGTCAGGATACTGGCAAGTATGTTTTTGGGGTTGATGATACTCTTACAGCGCTGGAGATGGGTGCAATTGAGATACTTATTGTCTGGGAAAGTCTGGATATAAATAGATATGTCTTGAAACACAGCACTAGCGGTGAAGTTGTTATAAAACATTTCAACAAGGAACAAGAGGCCAACCAGGACAACTTTCGGGATACTGCTGGAAATGCTGAATATGAGGTTCATGAAAAGATGTCTCTCCTGGAGTGGTTTGCCAATGAGTACAGACGGTTTGGCTGCACTCTTGAGTTTGTGACTAATAAGTCACAAGAGGGCTCACAGTTTTGCAGGGGTTTCGGTGGTATAGGGGGGATTCTGCGCTACCAGCTTGATATGAGGACATTTGACGACTTCTCTGATGATGAAAATGCGTATGATGATTCTGAATAG 1530 0.4359 MGSYFPNHGNLENKNCGHTSIKIGSSCSCAFSNKRLHVSANFVLGRRKLLLSLAASSLALSALRLLNFDCSKMADAHDTDKNIEVWKIKKLIKALEAARGNGTSMISLIMPPRDQISRVTKMLGDEFGTASNIKSRVNRQSVLGAITSAQQRLKLYNRVPPNGLVLYTGTIVTEEGKEKKVTMDFEPFRPINASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFSVDLPKKHGRGGQSALRFARLRMEKRHNYVRKTAELATQFYINPATSQPNVSGLILAGSADFKTELSQSDMFDPRLQAKILNVVDVSYGGENGFNQAIELSSEILANVKFIQEKRLIGKYFEEISQDTGKYVFGVDDTLTALEMGAIEILIVWESLDINRYVLKHSTSGEVVIKHFNKEQEANQDNFRDTAGNAEYEVHEKMSLLEWFANEYRRFGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQLDMRTFDDFSDDENAYDDSE 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele48g1104 509 PANTHER PEPTIDE CHAIN RELEASE FACTOR SUBUNIT 1 75 501 IPR004403 GO:0003747|GO:0006415
Lele48g1104 509 Gene3D - 351 509 IPR029064 -
Lele48g1104 509 TIGRFAM aRF1/eRF1: peptide chain release factor 1, archaeal and eukaryotic forms 85 489 IPR004403 GO:0003747|GO:0006415
Lele48g1104 509 Pfam eRF1 domain 2 216 349 IPR005141 -
Lele48g1104 509 FunFam Eukaryotic peptide chain release factor subunit 1 74 207 - -
Lele48g1104 509 FunFam Peptide chain release factor subunit 1 351 509 - -
Lele48g1104 509 Pfam eRF1 domain 1 90 210 IPR005140 -
Lele48g1104 509 SUPERFAMILY N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1 78 212 IPR024049 -
Lele48g1104 509 FunFam Eukaryotic peptide chain release factor subunit 1 208 349 - -
Lele48g1104 509 SUPERFAMILY L30e-like 350 492 IPR029064 -
Lele48g1104 509 SMART eRF1_1_2 76 212 IPR005140 -
Lele48g1104 509 Gene3D eRF1 domain 2 208 349 IPR042226 -
Lele48g1104 509 Gene3D eRF1 domain 1 69 207 IPR024049 -
Lele48g1104 509 Pfam eRF1 domain 3 353 490 IPR005142 -
Lele48g1104 509 SUPERFAMILY Translational machinery components 214 348 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele48g1104 Lele-ChrLele48 15786094 15790724 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele48g1104 73 507 Eukaryotic Initiation Factors Gene Family AT5G47880 88.736 0.0 803