Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele48g1099 ATGAGGGTCTTCTGTGAGGTTATCTTCGGTGCACTAACTCCTAAAGTTACTGCTTCTTTCTCCAACAGAGATTTTGTTCCTTTCCAAAAGCACCTTCTCAATTTGAAGGCCTTTTCTTCTGTCTCTTTCCGGCATCGAAAATGGTTTGTGCTCATTTCACAGCCCAGCTTGGTGAAGAAGACGAATGACAATAATGGCAGAACTGGTTGTTCCACTTCTAGCCAATGCAATGGTGCTTCAGAAGCTTTGGAGGGTGATTTCGTGGTTGTGAATTTTTACCATTTCGTGTTTATCGATGACCCGGAAGCAGAAGTCGCTAAGCACCTGGCTTTCATGGAGGGTCTTGACATAAATGGTAGAATTTACTTGAATGAACAAGGTATAAATGCGCAGTATAGTGGACCATCAAAAGATGCTCTGGCATATGTTGAATGGTTAAGACAAGATGACAGATTTTCTGGTATCCTGGTTCAGATTTCTCCATCAGTAAAAGGGCATGCCTTCCCGAGATTGAAGTTGCGGTATAAGCCTTCACTTGTACAGTTGGAAGGTGGCATATCACATCTTCCTCTTCTTGATCCTTTAATGCGAGCAACACCTTTAGTGCCATCAGAATGGAGAAATAGATTGGAAGCAATGAATAGGACTGATCTTGCTTCAAAAGAGTGTCCTGACACCAATTACATTCTATTGGATGTGAGAAATGGTTATGAGTGGGATATTGGACATTTTCGCGGTGCTTTGCGACCTGATGTGGACTGCTTTAGAAGCACTTCTTTTGGTTTGTCCGAGGAAGAGGTGGCTGCTTCAGATCCTTTAGCAAATGTAGATAAAGAAAAAACAAATATATTTATGTACTGCACCGGAGGGATTCGTTGTGATGTATATTCTACAATATTGAGAAAGAAGGGCTTTCGGAATCTGTACACCTTAAAGGGAGGTGTTTCTAACTATCTAAAGCATCAAGGTTCCGCCGAATGGGTAGGGAATTTATTTGTGTTCGACTCTCGTCTGTCTCTGCCTCCTTCTTCATACAATCCTGGAGCCACCACAACTGAAATAACAAACAGGACTCAAGTCTCTGCAAATGAAAACAAGTTTGCAAAATGTTACATATGTGGTTCTCAAGTCAGTGAATTGAGGCATAGGAACTGTGCAAATCTTGACTGCAATTTGCTTTTCCTATGCTGCAGAAAATGTGTGAAGGAAGTAAGGGGATGCTGTTGTTGGAGTTGCACAACTGCTCCAAGACTTCGGCCAGTTTTAGATGGAGAACTGAGATACAAAAAATGGCACATGTATCGTGATATTGATGTGCAGAGCAATATACCTTGA 1335 0.4172 MRVFCEVIFGALTPKVTASFSNRDFVPFQKHLLNLKAFSSVSFRHRKWFVLISQPSLVKKTNDNNGRTGCSTSSQCNGASEALEGDFVVVNFYHFVFIDDPEAEVAKHLAFMEGLDINGRIYLNEQGINAQYSGPSKDALAYVEWLRQDDRFSGILVQISPSVKGHAFPRLKLRYKPSLVQLEGGISHLPLLDPLMRATPLVPSEWRNRLEAMNRTDLASKECPDTNYILLDVRNGYEWDIGHFRGALRPDVDCFRSTSFGLSEEEVAASDPLANVDKEKTNIFMYCTGGIRCDVYSTILRKKGFRNLYTLKGGVSNYLKHQGSAEWVGNLFVFDSRLSLPPSSYNPGATTTEITNRTQVSANENKFAKCYICGSQVSELRHRNCANLDCNLLFLCCRKCVKEVRGCCCWSCTTAPRLRPVLDGELRYKKWHMYRDIDVQSNIP 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele48g1099 444 Pfam UPF0176 acylphosphatase like domain 88 177 IPR040503 -
Lele48g1099 444 Pfam Rhodanese-like domain 225 319 IPR001763 -
Lele48g1099 444 ProSiteProfiles Rhodanese domain profile. 224 327 IPR001763 -
Lele48g1099 444 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 200 337 IPR036873 -
Lele48g1099 444 PANTHER THIOSULFATE SULFURTRANSFERASE/RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 2 81 427 IPR020936 -
Lele48g1099 444 CDD RHOD_YceA 201 320 - -
Lele48g1099 444 SMART rhod_4 214 324 IPR001763 -
Lele48g1099 444 Pfam Rhodanase C-terminal 329 413 IPR022111 -
Lele48g1099 444 Gene3D - 76 180 - -
Lele48g1099 444 Gene3D - 196 358 IPR036873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele48g1099 Lele-ChrLele48 15753488 15756867 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele48g1099 86 441 Sulfurtransferasese or Rhodanese AT1G17850 68.595 0.0 531