LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele48g1090	ATGGCTAAGAGATCAGATTTTGCACAGAATCTGCTCGATGATTTGCATCTAAGGAAAGAACGAATGAATGCATCTTCTCAGAAGTCAAGCCAATCCAAACATCTTCCTGTAGATGCATATGTTTATTCCAAGCAAACGCAAAGGGGATCCAGGAGTTATAATAAAGGAAGTGAAAATTTTAGTTCCAGAACCGGGAACATGCCGAATACGAATAGGTCTAGCAGAAGCTATAGATCAACAAAAGCTGGTGAAGTTTCAAATCAGATTGTTCCATATGGGAGAGGTCAGAGATTGGAGCAAACTGGTGATGATATGTCCTTAGCCCTGGCCTTTCCGTTTGAGAATAATGGAGGGAAACTAAGAACTGATTCTTTCACCAGTTCATTCATGAGTTTCTTTAGCCACCTTAAAAGGGGAACATTGAGCTTTGGCAAGATAGAACGGCGAGGCAATTCGGGTCGAGAATTAGCTGCAACTAATCAGTTCCTTGCTCTCTCTCCTGTGCAGATAAATGAGATATACAAAGGTGCACAGCAATTAAACCAGATATTAGGTGCCTCCAACTCCAATGGTCTCACCATAGATAGACAATCGATAGAATTTGCAAAGGAATTGTTGCAGGGTGCTATAAATTTGGAGGAGTCCCTCAAGATCATAGTAAACCAGCAGAAGAAAGTGATGACACAGAAGAAAAATGGGATCATATTATTAGAGGATGATGATGATGATGGAGGAGAAGAAGAAGAAACCAAAACTTCAGAGCAAAAGCAACTAGCACCACCAGTTTTCTCCTTTGACAAGCGCTCTAAACATTCTCAAAACCTTCAAGGGAATCAAAACACAAGTCTCATGAAGACAAGTTACTCCAAAGGCAAGAAATTAAATAACGAAAAGCAAGATGTCAACACACCGAAATTGCTTCCTCGTCATAAGCGATCGATTAGCGATGGCTCTAATATGAAGAGTTTCAATGCTGTTTCTAAACAAAATAATCACTTGGACTCAGTGCACTCTGATTCAGAAATTAGTAAGATACCAAATGTAATAGCCAAATTGATGGGTTTGGATAATCTTCCAGAGAAAGTTGAAGGGAAATACACCCAACAGAAGGATTCAAAAGGAAGTGAGAAGAAGATGGAACTGAAGAGCAGACAAACAGAGAACTTGTTACCTCAGAAAAAGCAAAAAGTGATAGAAGCCACTACCATGCCTGCAACCCGGCATAAGGAGCTCGGTGTTGATAAAAATTTGAATACGAGGAAGGCGAAATCTGAGGCGGTCGTTGATAAAGGAGTAAGAGCACTGAAAGGCTCAGATAAGAGCATAAAAAGTGACAAGAAAAATGACAGTACTATGAGAGTCCATTTTATCAGAGAAAATCGAATAGGGGTTCAGGAGAAAGGAAAAAGACAGGCTCACACAAATAATAGAGAAGAGAAAGGCACAGGAAAAGGCAGAACCAATGATCTAGTTCTAAATAACATGCTGAATCGGATGGAACAAGTTCATGGAAGATCAGAAGTTAAATCTTTATCGCAGGAACAACAAAAGGAAACCAATGGAAGCATTCATCAATCTGAAAAGAGACACACAAACATTAGGGAATCAAAACATGTCTCAGAATCATCTTGGAATTCAAGAGTCAAGCTTGGTCTTGAAATCAAAGAGATGATGAATAAGGAGTCAATTAAACTTTCCTCTCCAAGAGATCAAGTTAAGGGAAAGCCGGGCATCTTGAAAATGATGGTTGAAAGAAGTGTTCACAAATTACCTGACAAGAAGCATCAAGGTGTGAAGTCAGTGACAATCAGAGATTCGCCAGATCGAGCTGTTCTTGTCACAGCAGATGAAGGGTTGGAGACTCGTCAAATTGCACCAGACACCATAAATAGAATGCATGAAGACAGAATGAACATTAACTCTCACTTACAAGTGCTAGGCCAGAAAATTTCTGGAAAAAGTCCAAAACCACTCACAGAAAGTGAAAACCGCCTCAAGTGGAACTTGATCAAGAGTCAATTATTCCTTAACACTGCAGAAACACTTCACAGATTTGACATGCCATTTAGCAGTCCCCTTGGAAGTGGTTGTTGGGATAATCAAGACTTAAACAGCAAACTCATGTTAGACTGTGGATATGAAGTCATGAAACGAAAGGGATACGACGAGAGTTCAAAGTTCATCCTTGCTCAAAGGCAGCGGAATGAAGACATAGAGAAGCTAAAATTCTATGGAAGAAGCAAGATTTCCCAAGTTGAAATGGAGGACTACTTTCCTAAAATGCTAGAAAATGATGTGTACAATGAGGATCCAGATATTGACTGTATGTGGGAATTGGTTGGAACGATGATACATTTGCCCTTATTGAGAAATATGAAGTTATAA	2385	0.3962	MAKRSDFAQNLLDDLHLRKERMNASSQKSSQSKHLPVDAYVYSKQTQRGSRSYNKGSENFSSRTGNMPNTNRSSRSYRSTKAGEVSNQIVPYGRGQRLEQTGDDMSLALAFPFENNGGKLRTDSFTSSFMSFFSHLKRGTLSFGKIERRGNSGRELAATNQFLALSPVQINEIYKGAQQLNQILGASNSNGLTIDRQSIEFAKELLQGAINLEESLKIIVNQQKKVMTQKKNGIILLEDDDDDGGEEEETKTSEQKQLAPPVFSFDKRSKHSQNLQGNQNTSLMKTSYSKGKKLNNEKQDVNTPKLLPRHKRSISDGSNMKSFNAVSKQNNHLDSVHSDSEISKIPNVIAKLMGLDNLPEKVEGKYTQQKDSKGSEKKMELKSRQTENLLPQKKQKVIEATTMPATRHKELGVDKNLNTRKAKSEAVVDKGVRALKGSDKSIKSDKKNDSTMRVHFIRENRIGVQEKGKRQAHTNNREEKGTGKGRTNDLVLNNMLNRMEQVHGRSEVKSLSQEQQKETNGSIHQSEKRHTNIRESKHVSESSWNSRVKLGLEIKEMMNKESIKLSSPRDQVKGKPGILKMMVERSVHKLPDKKHQGVKSVTIRDSPDRAVLVTADEGLETRQIAPDTINRMHEDRMNINSHLQVLGQKISGKSPKPLTESENRLKWNLIKSQLFLNTAETLHRFDMPFSSPLGSGCWDNQDLNSKLMLDCGYEVMKRKGYDESSKFILAQRQRNEDIEKLKFYGRSKISQVEMEDYFPKMLENDVYNEDPDIDCMWELVGTMIHLPLLRNMKL	794

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele48g1090	794	MobiDBLite	consensus disorder prediction	289	322	-	-
	Lele48g1090	794	MobiDBLite	consensus disorder prediction	459	485	-	-
	Lele48g1090	794	PANTHER	OS01G0228800 PROTEIN-RELATED	8	600	-	-
	Lele48g1090	794	MobiDBLite	consensus disorder prediction	363	384	-	-
	Lele48g1090	794	MobiDBLite	consensus disorder prediction	43	83	-	-
	Lele48g1090	794	MobiDBLite	consensus disorder prediction	503	542	-	-
	Lele48g1090	794	MobiDBLite	consensus disorder prediction	459	489	-	-
	Lele48g1090	794	Pfam	DUF761-associated sequence motif	339	361	IPR032795	-
	Lele48g1090	794	MobiDBLite	consensus disorder prediction	237	262	-	-
	Lele48g1090	794	MobiDBLite	consensus disorder prediction	18	37	-	-
	Lele48g1090	794	MobiDBLite	consensus disorder prediction	521	542	-	-
	Lele48g1090	794	MobiDBLite	consensus disorder prediction	42	83	-	-
	Lele48g1090	794	MobiDBLite	consensus disorder prediction	291	316	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele48g1090	Lele-ChrLele48	15682210	15686845	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele48g1090	1	237	TRM (TON1 Recruiting Motif) Superfamily	AT5G42710	38.934	1.05e-28	121