Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele48g1087 ATGGAGGGGGATAATGGTCTTGACATACGAAATTGGGGTTACTATGAACCCACAACTTCCTTTAAGAATCATCTCGGACTCCAGCTGTCCTCCGTGCCTGAAAAACCCATGCTTGGAGGGCGCAGTGCTGCTGTTTTGTCTGGAAACAATGTTGCATTTCACCATAGGACCGTTGGTATGGCACAAGCAACTTATCCTATGGAGTACATGAGGGAAGCTTGGATTAGTCAAAGAGAGAAGTTTTTGAACATGATTCCGACAAACCCAACAAACTTTGCTGCTGTTATTCCAGAGACATCTTCAGCCCATCACATGCAGTTGGTTCCACCGCCTGACTTGATAAAGGAAGAAAGACCGATGGAAGAGGCACCCGTTGAGAAGATCAATGGCACTAGTAAGAAAAGGCAGGGTCCACCCAAGGTACCCAAAGCTTCCAAGGCGAAAAAGCCCAAGAGAGGACCTCGTGCGCCGAAGGATGAGAATACTCTTTCTGTTCAACGGGCAAGGTCAGCAAAGAAGACTACTGAAGTTGTGATAAATGGGATCGGTATGGATATCTCGAGTATTCCTATTCCAGTTTGTTCATGCACCGGGATGCCTCAACAGTGTTACAGATGGGGTTCTGGTGGGTGGCAATCTGCTTGTTGCACAACAAATATGTCAATCTATCCATTGCCTATGAGTACAAAGCGGCGTGGTGCTAGGATAGCTGGGAGAAAAATGAGTATAGGAGCATTTAAGAAAGTCTTAGAGAAACTTGCAGCTGAGGGTTATAACTTCTCTAATCCGATCGATTTGAAGACTTATTGGGCAAAACATGGCACTAACAAGTTTGTCACTATCAGGTAG 849 0.4558 MEGDNGLDIRNWGYYEPTTSFKNHLGLQLSSVPEKPMLGGRSAAVLSGNNVAFHHRTVGMAQATYPMEYMREAWISQREKFLNMIPTNPTNFAAVIPETSSAHHMQLVPPPDLIKEERPMEEAPVEKINGTSKKRQGPPKVPKASKAKKPKRGPRAPKDENTLSVQRARSAKKTTEVVINGIGMDISSIPIPVCSCTGMPQQCYRWGSGGWQSACCTTNMSIYPLPMSTKRRGARIAGRKMSIGAFKKVLEKLAAEGYNFSNPIDLKTYWAKHGTNKFVTIR 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele48g1087 282 Pfam GAGA binding protein-like family 1 282 IPR010409 -
Lele48g1087 282 SMART GAGA_bind_2 1 282 IPR010409 -
Lele48g1087 282 MobiDBLite consensus disorder prediction 112 129 - -
Lele48g1087 282 PANTHER - 1 282 IPR010409 -
Lele48g1087 282 MobiDBLite consensus disorder prediction 112 170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele48g1087 Lele-ChrLele48 15661561 15662409 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele48g1087 4 282 BBR or BPC Transcription factor family AT2G01930 51.536 6.70e-97 285
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Lele48g1087 GAGA_bind 2.2e-103 No_clan