Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele48g1070 ATGATAATGCTGCTTCATAAACTGTCCATTTTGCTCAGTTTCTTCCTGGTTTTGCTTCCTCTGGTTAGACCAGATCTGGCTTCTGAGAGACTCGCTCTCGTTTCTCTCCGTTCGGCCGTCGGTGGCCGAACCCTTTTCTGGAACGTTTCTGAGCAGAGTCCATGCAAGTGGTTCGGAGTCCAGTGCGAAAACGACCGTGTCGTCCAGCTTCATCTTCCCGGCGTTGCGCTTTCCGGCTCAATTCACACCGGCATTTTCGGCAACTTAACTCGTCTTCGAACTCTGAGCTTGCGTTTCAATGCTTTGAAAGGTGTGCTTCCTGAAGATCTCGCTTCTTGCGTTAATCTTCGTAACCTTTACTTGCAGCAGAATCTTCTCTCCGGTGAAATTCCAGATTTCCTGTTTGCTTTACCGGACTTGGTCCGGCTTAATTTGGCGTCCAACAAGTTTTCCGGCTCAATTCCGTTGGGTTTCAACAATTTGACGAGGCTGAGAACTTTGTTCCTTGAAAACAACAATCTCTCAGGTGCCATCCCCAAGTTAAACCTTGTAAACCTTGAACAATTCAATGTTTCAAACAATATGCTGAATGGTTCAGTGCCAGAAAAGTTACAAACTTTCGCCAAAGATTCATTTCTAGGAACCTCCCTATGTGGGAAACCCCTCAATCTTTGTCCAGGAGACGTAAATGGAACCGGAACCAGAGCCGGAACTGGAATGGGAAAATCTCCGACGCCTGAGATTGTAAACAATGAGAGAAACATGAAGAAGAAGAAGAAACTTTCAGGTGGTGCCATTGCCGGAATCGTTGTAGGATCGGCAGTGTGTCTTCTGTTGATTCTTTTCGCTCTGATCATATTATGCCGAAAGAGCAGTAATCAGAAGACAAGGTCGCTGGACTTTTTAACTGAGAAGCATCTTGAAGTGCCAATTCGAGGCGACAAACCGGTTTCAGAACTGGAACACAGTAATGCCTACTTGGCTGCTGCGGGGGAGACTGCGGCGGCGTCGTCGGCGACCGAGAACGGCGCCGCAGCGAAAAAGCTGGTATTTTTTGGACATTCACAGAAGGTGTTTGATCTTGAGGATTTGCTTAGGGCTTCTGCAGAAGTTTTGGGCAAAGGAACATTTGGAACAGCCTATAAGGCGACTCTTGAGGATGGGCCTGTGGTGGCGGTGAAGCGATTGAGGGATGTGAGGATTTCTGAAACAGAGTTGAAGGAGAAGATTGAAGCAGTAGGAACAATGAATCATGAGAATTTGGTTCCTCTCATGGCTTACTATTATAGCGGAGAAGAAAAGCTTCTTGTTTATGATTACATTCCCACAGGAAGTTTATCTGCACTTTTGCATGGAAACAAAGGGGCTGGTAGGGGGCCACTGAATTGGGAAGCGAGATCAGGCATTGCTCTTGGAGCTGCTAGAGGCATTGAGTACATTCACTCACAAGGGACTAATTTTTCTCATGGAAACATAAAATCATCCAACATCCTCCTCACCAGATCCTTGGACGCTAAAGTATCCGACTTTGGCCTCGCTCACCTCGCTAGTCCCTCCTCCACTCCGAACCGAGTCACCGGGTACCGTGCTCCTGAGGTAACTGATCCTCGCAAGGTATCTCAGAAGGCGGATGTCTATAGCTTTGGAGTATTGCTCTTGGAATTGCTTACGGGGAAGGCCCCGGCCCACGCACTCTTGAATGATGAAGGAGTAGACCTACCTAGATGGGTTCAATCTGTTGTCAGAGAAGAGTGGACCTCCGAGGTGTTCGATCTTGAGCTTCTCAGGTATCAGAATGTCGAGGAGGAGATGGTTCAATTGTTGCAACTCGCAGTTGATTGTGTCGCTCCGTACCCTGATAATCGCCCATCGATGTCAGAAGTCACGAAGCGCATTGAAGAGTTACGAGAGGCTAGCTTGAAACGTGATCAAGACCGAATCCAAAATCCTGATCCGATCGATGTTATATCTTCTCACTGA 1980 0.4753 MIMLLHKLSILLSFFLVLLPLVRPDLASERLALVSLRSAVGGRTLFWNVSEQSPCKWFGVQCENDRVVQLHLPGVALSGSIHTGIFGNLTRLRTLSLRFNALKGVLPEDLASCVNLRNLYLQQNLLSGEIPDFLFALPDLVRLNLASNKFSGSIPLGFNNLTRLRTLFLENNNLSGAIPKLNLVNLEQFNVSNNMLNGSVPEKLQTFAKDSFLGTSLCGKPLNLCPGDVNGTGTRAGTGMGKSPTPEIVNNERNMKKKKKLSGGAIAGIVVGSAVCLLLILFALIILCRKSSNQKTRSLDFLTEKHLEVPIRGDKPVSELEHSNAYLAAAGETAAASSATENGAAAKKLVFFGHSQKVFDLEDLLRASAEVLGKGTFGTAYKATLEDGPVVAVKRLRDVRISETELKEKIEAVGTMNHENLVPLMAYYYSGEEKLLVYDYIPTGSLSALLHGNKGAGRGPLNWEARSGIALGAARGIEYIHSQGTNFSHGNIKSSNILLTRSLDAKVSDFGLAHLASPSSTPNRVTGYRAPEVTDPRKVSQKADVYSFGVLLLELLTGKAPAHALLNDEGVDLPRWVQSVVREEWTSEVFDLELLRYQNVEEEMVQLLQLAVDCVAPYPDNRPSMSEVTKRIEELREASLKRDQDRIQNPDPIDVISSH 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele48g1070 659 ProSiteProfiles Protein kinase domain profile. 366 635 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele48g1070 659 Pfam Leucine rich repeat 80 126 IPR001611 GO:0005515
Lele48g1070 659 PANTHER OS05G0588300 PROTEIN 10 642 - -
Lele48g1070 659 ProSitePatterns Protein kinases ATP-binding region signature. 372 394 IPR017441 GO:0005524
Lele48g1070 659 Pfam Leucine rich repeat N-terminal domain 27 62 IPR013210 -
Lele48g1070 659 FunFam Probable inactive receptor kinase RLK902 26 182 - -
Lele48g1070 659 Gene3D Ribonuclease Inhibitor 31 137 IPR032675 -
Lele48g1070 659 FunFam pollen receptor-like kinase 1 335 440 - -
Lele48g1070 659 Gene3D Ribonuclease Inhibitor 140 225 IPR032675 -
Lele48g1070 659 FunFam Probable inactive receptor kinase At1g48480 441 643 - -
Lele48g1070 659 Gene3D Phosphorylase Kinase; domain 1 331 440 - -
Lele48g1070 659 SUPERFAMILY Protein kinase-like (PK-like) 370 636 IPR011009 -
Lele48g1070 659 MobiDBLite consensus disorder prediction 639 659 - -
Lele48g1070 659 SUPERFAMILY L domain-like 36 206 - -
Lele48g1070 659 Pfam Protein kinase domain 369 630 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele48g1070 659 Gene3D Transferase(Phosphotransferase) domain 1 441 654 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele48g1070 Lele-ChrLele48 15525842 15528464 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele48g1070 25 639 Receptor kinase-like Gene Family AT1G48480 62.963 0.0 769
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lele48g1070 Pkinase 1.9e-39 CL0016