Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele48g1068 ATGGTAAGGCTTTATAGAGAAGGAACAAACAAGAGCTTAGAGAGTTTACTGGAGTTGAACAAGATTGAGACGACGACGACGACAGCGAAGAAGCAGCTGAGAGCGCAGAAGTCGATTCCTGGGCATGGGTTGGAGTTCAATAATCTGTCGTATAGTGTGGTGAAGAAGGTGAAGAAAGATGGGGCTTGGGTGAAGAAAGAGGCTTATCTTCTTCATGATATATCTGGGCAAGCCATGAGAGGTGAAGTTATGGCCATCATGGGACCTAGCGGTGCAGGTAAGTCCACTTTTCTTGATGCTTTGGCTGGTCGAATTGCTCAAGGCAGCTTGGAAGGATCTGTCAGAATTGATGGAAAACCAGTGACAACGAGTTACATGAAGATGGTGTCGTCTTATGTAATGCAAGATGATCAGTTGTTTCCTATGTTGACTGTTTTTGAGACATTCATGTTTGCAGCTGAGGTTAGGCTTCCTCCTTCTATCTCCAGAGAGGAAAAGAAGAAGAGGGTTTATGAGCTCCTTGATCAGCTTGGCTTGCAGAGTGCAACACATACATACATTGGTGATGAGGGGACGAGAGGAGTGTCAGGAGGAGAAAGACGAAGGGTGTCCATTGGCATAGACATAATACATAAGCCATCACTTCTGTTTCTTGATGAACCAACCTCAGGTCTTGATTCCACCAGTGCTTTTAGTGTCGTCGAAAAGGTTAAGGACATTGCTCGAGCTGGAAGCATCGTCCTCATGACCATTCATCAGCCTTCCTACAGAATCCAAATGCTCCTCGATCGTCTCACCATCCTCGCAAGGGGAAGATTGATATACATGGGAAAGCCAAGTACAGTTGCAGATCATCTTTCTGGGTTTGGAAGACCAGTACCTGATGGAGAGAACAGCTTAGAATATCTTTTAGATGTCATCAAAGAATTCGACGAATCCAACGTTGGACTCGACCCACTTGTTTTCTACAATCGGGATGGTCTGAAACCTGAACAATTAGCCAAGACACCAATTGTGAAAACTCCAAGAACAATTTATAAAAAGAGCAACATCACACCAGCTTCAAGGCACATGATTAGCCTCAAAAGCCAAGGCTTCAAAGCTGGAACAACCACACAGCCTGCAGATTCTGCACAGTTTAGTTATAACATTCATGGTGATCATGACGAAGATGACGACGATGACGGGGATTTCGATAACTCTCTTGAAAGGAAAAGTACCGTTCACACCCCTAGGGCAAATACCATGACTAGTGGTGTTTATCCTCGTTTGGCTTCTCAGTTTTATAAGGATTTCTCTGCCAAAGATTTTTCTGTTTGGCTTTACCATGGTGTGGTGGGAACTCCTCGTCGTCCGTCATGGACTCCGGCGAGAACACCGGGTTTGACGCCGGCGAGAACTCCGATGTCCGGAACAAGAAGGACCGTTTTCAACCAGTATTCGGAATCATATGAGGAGCCTTATCATCATCATGCCAAAACACCATCAATAGTTAGTCAATCCATTGCCTTGGACTCGTACGTAAGTTCGTACTCGGAATTCGACATTGAAGTTCTTGATGAACCCAACGTTGGATCAAAGTACGCTAATCCATGGCTTCGTGAAGTTGCAGTGCTTTCATGGCGAACAGCTCTAAACGTAATTCGAACCCCAGAACTGTTCCTTTCTCGTGAGATTGTTCTAACTGTAATGGCCCTAGTTCTCTCCACCATCTTCAAAAATCTAAGCCACCCAACTTTCAAGGACATTAACAGAATTCTCAACTTCTACATCTTCTCTGTCTGCCTCGTCTTCTTCTCTTCAAACGACGCCGTTCCGTCTTTCATCCTTGAGAGATTCATCTTCATCAGAGAAACTTCCCACAATGCTTACCGTGCTTCTTCATACGTAATCTCTTCACTGATTGTTTATCTCCCATTTTTCGCAGTCCAGGGCCTCACTTTTGCTATCATAACCAAATTCATGCTTCACCTGAAAAGCAGTCTCTTCTATTTCTGGTTGATTCTTTATGCTTCTCTGATCACAACCAATGCTTACGTCATGTTAGTTAGTGCTCTTGTTCCTAGTTATATCACAGGTTATGCAGTGGTGATTGCTACAACGGCTTTATTCTTTCTCACTTGTGGCTTCTTCCTCAAGAGAACTCAGATTCCTGATTACTGGAAATGGCTTCATTATATTTCTGCAATTAAGTATCCGTTTGAAGCTTTGTTGACGAATGAGTTTAAGAATGAGCGGTGCTACAGAGGGAGCTTATCGGAATTGTCGCCGGGGCCGTTGGGAGAAGTGAAGCAGAGTGAAGGACATGACCGGTCCAATTGTCCGATCGGATTGATCGGAGAAGATGTTTTGGCCACCATGGATATTCAGATAGAGAAGATTTGGTTTGATATAGCTATCCTTCTTGCTTGGGGTGTTCTTTACAGGTTCTTCTTCTATTTGGTTTTGAGATTTTATTCTAAGAATGAGAGGAAGTAA 2478 0.4391 MVRLYREGTNKSLESLLELNKIETTTTTAKKQLRAQKSIPGHGLEFNNLSYSVVKKVKKDGAWVKKEAYLLHDISGQAMRGEVMAIMGPSGAGKSTFLDALAGRIAQGSLEGSVRIDGKPVTTSYMKMVSSYVMQDDQLFPMLTVFETFMFAAEVRLPPSISREEKKKRVYELLDQLGLQSATHTYIGDEGTRGVSGGERRRVSIGIDIIHKPSLLFLDEPTSGLDSTSAFSVVEKVKDIARAGSIVLMTIHQPSYRIQMLLDRLTILARGRLIYMGKPSTVADHLSGFGRPVPDGENSLEYLLDVIKEFDESNVGLDPLVFYNRDGLKPEQLAKTPIVKTPRTIYKKSNITPASRHMISLKSQGFKAGTTTQPADSAQFSYNIHGDHDEDDDDDGDFDNSLERKSTVHTPRANTMTSGVYPRLASQFYKDFSAKDFSVWLYHGVVGTPRRPSWTPARTPGLTPARTPMSGTRRTVFNQYSESYEEPYHHHAKTPSIVSQSIALDSYVSSYSEFDIEVLDEPNVGSKYANPWLREVAVLSWRTALNVIRTPELFLSREIVLTVMALVLSTIFKNLSHPTFKDINRILNFYIFSVCLVFFSSNDAVPSFILERFIFIRETSHNAYRASSYVISSLIVYLPFFAVQGLTFAIITKFMLHLKSSLFYFWLILYASLITTNAYVMLVSALVPSYITGYAVVIATTALFFLTCGFFLKRTQIPDYWKWLHYISAIKYPFEALLTNEFKNERCYRGSLSELSPGPLGEVKQSEGHDRSNCPIGLIGEDVLATMDIQIEKIWFDIAILLAWGVLYRFFFYLVLRFYSKNERK 825
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele48g1068 825 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 45 286 IPR027417 -
Lele48g1068 825 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 44 295 IPR003439 GO:0005524
Lele48g1068 825 Pfam ABC transporter 71 223 IPR003439 GO:0005524
Lele48g1068 825 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 25 812 - -
Lele48g1068 825 Pfam ABC-2 type transporter 536 742 IPR013525 GO:0016020|GO:0140359
Lele48g1068 825 CDD ABCG_EPDR 44 277 - -
Lele48g1068 825 Pfam ABC-2 type transporter 252 309 IPR043926 GO:0140359
Lele48g1068 825 ProSitePatterns ABC transporters family signature. 195 209 IPR017871 GO:0005524|GO:0016887
Lele48g1068 825 Gene3D - 43 289 IPR027417 -
Lele48g1068 825 SMART AAA_5 80 280 IPR003593 -
Lele48g1068 825 MobiDBLite consensus disorder prediction 381 416 - -
Lele48g1068 825 FunFam ABC transporter G family member 6 59 286 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele48g1068 Lele-ChrLele48 15503920 15507396 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele48g1068 81 277 Calmodulin-binding Proteins AT2G36910 25.500 4.03e-08 55.5