Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele48g1059 ATGTGTGGAGGTGACATCATCTCCGACTTCGTCCCTCAGAAACCTTGTCGGAGATCGACCACCAACGACCTCTGGTCCGACCTCGAAACCTTCGCCGACCTCCTAGGATTCGATACCACCACTGCTGCTCTCTCTTCCAAACACCACAAGCCAGCTGCTTCCCCTAATCATGATCATAAACTCCATCCCATTCCAACCACCCCAGCAGTGTCACGTGAGAATAATAACAAAAATGACAATAACAACACCAACAAGTCGTCGGAGAAGAAGAAAAGCGGAGGAGGAAGGACTCGCAAGAACATTTACAGAGGAATCCGGCAAAGGCCGTGGGGCAAGTGGGCAGCCGAGATAAGGGACCCACACAAGGGCGTCCGAGTCTGGCTCGGCACCTTCAACACGGCCGAAGAAGCCGCCAGAGCCTACGACCGAGCTGCCAAGCGCATCCGCGGTGACAAAGCCAAGCTCAACTTCCCGCTGGCTCCTCCAACTCCTCCTCCGGCTCCCATGGAACCGCCCCAGAAGAAGCAGTGCCTCGTCCCCGGCCATAATAACGACGCCGTTCAGCTCAACCAACAAATCTCAACCCTGGAATCCTTCTTCGGTCTGGACGACAACAACAAGAACAACACTGCTGATGTTTCGCAGCCAATCGGAGCAAGCGGTGGCTTACTCTCTGAGTGGGACCCGATGGACGATCTCTGGATGCTCAACGACCCCGTTATGCATCACCTTCATAATAACGGTCCCTACTAG 753 0.5471 MCGGDIISDFVPQKPCRRSTTNDLWSDLETFADLLGFDTTTAALSSKHHKPAASPNHDHKLHPIPTTPAVSRENNNKNDNNNTNKSSEKKKSGGGRTRKNIYRGIRQRPWGKWAAEIRDPHKGVRVWLGTFNTAEEAARAYDRAAKRIRGDKAKLNFPLAPPTPPPAPMEPPQKKQCLVPGHNNDAVQLNQQISTLESFFGLDDNNKNNTADVSQPIGASGGLLSEWDPMDDLWMLNDPVMHHLHNNGPY 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele48g1059 250 MobiDBLite consensus disorder prediction 46 104 - -
Lele48g1059 250 Gene3D AP2/ERF domain 101 160 IPR036955 GO:0003700|GO:0006355
Lele48g1059 250 SUPERFAMILY DNA-binding domain 101 159 IPR016177 GO:0003677
Lele48g1059 250 PANTHER DNA-BINDING DOMAIN 59 188 IPR044808 GO:0003700|GO:0009873
Lele48g1059 250 MobiDBLite consensus disorder prediction 68 82 - -
Lele48g1059 250 FunFam Ethylene-responsive transcription factor 2 100 159 - -
Lele48g1059 250 PRINTS Ethylene responsive element binding protein signature 124 140 IPR001471 GO:0003700|GO:0006355
Lele48g1059 250 PRINTS Ethylene responsive element binding protein signature 102 113 IPR001471 GO:0003700|GO:0006355
Lele48g1059 250 Pfam AP2 domain 102 150 IPR001471 GO:0003700|GO:0006355
Lele48g1059 250 ProSiteProfiles AP2/ERF domain profile. 101 158 IPR001471 GO:0003700|GO:0006355
Lele48g1059 250 CDD AP2 101 157 IPR001471 GO:0003700|GO:0006355
Lele48g1059 250 SMART rav1_2 101 164 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele48g1059 Lele-ChrLele48 15450700 15452128 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele48g1059 1 243 AP2-EREBP Transcription Factor Family AT3G16770 38.811 5.74e-52 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele48g1059 AP2 9.4e-15 CL0081