Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele48g1058 ATGGTTTGGGCTGTCTTAAAACCTGGATTCTTGGCATTGCTGGCTGATCCATCTGGTAGCCAACCTTTGGACATCATTGTTTTTTATGTTCTACCTGCCTCAGATGGGAATGGGGATGGTCATGTATCACTGGCAAAAGAAATGAAGGAACGACATCCTTTACGCCATTCATTCAAGGATGGTGTCATCCTCATCGCTATGGTTCATTTGCTCCTAAAAAGAGGCTTGATTGAAGATGGAAGTCAGGCCCAGCGGTTTGTTGATGTCAGGGCAGCATTTGAGGCCATTGCTTCATCAATTGAGGATGCAAAATCAGAGGTGGCTCTTGCTTTGAAAATTAACAGTGTCTATAGCAAGAGAAAGCTTCTTAGCATTCATGAAAATGTGAGGGTACTACGCTATCCTGACCACTTTTCTTCTGGTGTTGACCTGTGGTCAAACCATGAAAAACTGGTCATTGTTGATCACCAGATTTGTTTTATTGGAGGATTGAATTTATGCTTTGGTCGTTATGATACATCTGAACACAAAGTGCGAGACTCCCCTCCACTGATATGGCCAGGGAAGGACTATTATAACCCTAGATTGCAATTTCCTGCTGATGCAATTTCATTTAGTGATGATGTGGAAAAATAG 636 0.423 MVWAVLKPGFLALLADPSGSQPLDIIVFYVLPASDGNGDGHVSLAKEMKERHPLRHSFKDGVILIAMVHLLLKRGLIEDGSQAQRFVDVRAAFEAIASSIEDAKSEVALALKINSVYSKRKLLSIHENVRVLRYPDHFSSGVDLWSNHEKLVIVDHQICFIGGLNLCFGRYDTSEHKVRDSPPLIWPGKDYYNPRLQFPADAISFSDDVEK 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele48g1058 211 Gene3D Endonuclease Chain A 54 182 - -
Lele48g1058 211 SMART pld_4 143 170 IPR001736 GO:0003824
Lele48g1058 211 Pfam Phospholipase D Active site motif 144 170 IPR001736 GO:0003824
Lele48g1058 211 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 143 170 IPR001736 GO:0003824
Lele48g1058 211 PANTHER PHOSPHOLIPASE D 113 196 IPR015679 -
Lele48g1058 211 SUPERFAMILY Phospholipase D/nuclease 63 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele48g1058 Lele-ChrLele48 15436657 15439638 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele48g1058 2 199 Phospholipase D Gene Family (Wang group) AT3G16785 50.896 7.83e-68 222