Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele48g1036 ATGGTAAGAGCACCGTGCTGCGAGAAAGTGGGATTGAAGAAAGGAAGATGGACGGCTGAAGAAGATAAGATATTGACAGAGTACATCGAACAACACGGCGAAGGCTCCTGGAGGAACTTGCCCAAGAATGCTGGTCTTCAAGATGGTGCCATATCGGCTTCTTTATGTACAAGTGATGATAATCTTGAGACCGTGGGACCATATCAGTGGCTAGACGATGAGATAAAGAAGCTGAGTTACATGTTGGAAAATGGGATGTTTATGAACCCGAGTGAGAATTATGTGGAACCAGAAAATGAATTAGAGCTGAGCAGAATTAACATGGCGGGAGGAGATTTGTATGAACTTGTGGGAAAGCAGATAATGGGAGCAAGTGATGAGGATGTTATGAGCAGAAACGATAACATTAATTCGTCAGAGATTTCTGTCTATGATTATCAGTGGCTCGATTGGGATTACAATCAACAAGATATTTGTGAAGAAGATAACCTGCATGGGAACTATTTGTGGGGTGATGGAAATGGTAGTGTAGAATTTGGGGGAAGTTTGTGTTCATATTAA 561 0.4189 MVRAPCCEKVGLKKGRWTAEEDKILTEYIEQHGEGSWRNLPKNAGLQDGAISASLCTSDDNLETVGPYQWLDDEIKKLSYMLENGMFMNPSENYVEPENELELSRINMAGGDLYELVGKQIMGASDEDVMSRNDNINSSEISVYDYQWLDWDYNQQDICEEDNLHGNYLWGDGNGSVEFGGSLCSY 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele48g1036 186 Gene3D - 8 49 - -
Lele48g1036 186 ProSiteProfiles Myb-like domain profile. 9 42 IPR001005 -
Lele48g1036 186 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 45 IPR017930 -
Lele48g1036 186 CDD SANT 16 45 IPR001005 -
Lele48g1036 186 Pfam Myb-like DNA-binding domain 14 43 IPR001005 -
Lele48g1036 186 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 49 - -
Lele48g1036 186 SUPERFAMILY Homeodomain-like 8 45 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele48g1036 Lele-ChrLele48 15275127 15277013 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele48g1036 1 129 MYB Transcription Factor Family AT2G47460 38.760 4.61e-21 87.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lele48g1036 Myb_DNA-binding 1.2e-06 CL0123