Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lele48g1030 ATGTTAGTTTTACTTTTGAGACTTGCATATTTCTGTTGGGAAATTTTGTGGTTAAACTTGTGCTGTAATGCAGTTTATATTGGTTACCAAAATGGCAGGACTTATAGTGACTCTAGCTTTCATGTTCGCCCAAATGATGTTCCTATGGAAGTTTTCACTTTCTCTGAGGAGAACACCTCCGCTGTTGCTCCTGCCACTCTCTACAAAGCTCTCGTCTTTGATGGCGACAACCTCATCCCCAGGTTTGTCGATGCCGTCCAGAGCGTTGACATCCTCGAAGGCACTGGTGGCGCAGGAACCATCAAGAAGATCAACTACCTCAAAGGTCGGTGTGCAGCTTGCAAGAATCAAAGAAGAAAGTGTCCTTCAGATTGCATTTTCTCTCCCTATTTTCCTCCCAATGATCCTGAAAGATTCGCTTGTGTTCATAGAATATATGGTAGCAGCAACGTTGGAAAAATGCTTCAGCAAATTCCAGTGCAAATGAGAGCACAAGCAGTGGATACATTATATTTTGAAGCAAGATGCAGAATGGAAGATCCTGTATATGGTTGTGTTAAGCTTATTTCTCAGTTACATCAGAACTTGCATGATACAGAAAGTGAACTAGCAAGAATTCAAGCTCTTGTTGCATGCCACAAGCTCCAAATTTCACAAGTTGAACTTCACCAACCTAATTTGGATGCATCACAAAGCAATATGGAGCAGTTTCAGTTCAATTATTCTACTCAGAATCCAACTTGGTTTATTAATTAA 756 0.4074 MLVLLLRLAYFCWEILWLNLCCNAVYIGYQNGRTYSDSSFHVRPNDVPMEVFTFSEENTSAVAPATLYKALVFDGDNLIPRFVDAVQSVDILEGTGGAGTIKKINYLKGRCAACKNQRRKCPSDCIFSPYFPPNDPERFACVHRIYGSSNVGKMLQQIPVQMRAQAVDTLYFEARCRMEDPVYGCVKLISQLHQNLHDTESELARIQALVACHKLQISQVELHQPNLDASQSNMEQFQFNYSTQNPTWFIN 251
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lele48g1030 251 Coils Coil 189 209 - -
Lele48g1030 251 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 110 235 - -
Lele48g1030 251 SUPERFAMILY Bet v1-like 52 109 - -
Lele48g1030 251 Pfam Lateral organ boundaries (LOB) domain 110 207 IPR004883 -
Lele48g1030 251 PRINTS Major pollen allergen Bet V1 signature 74 84 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Lele48g1030 251 PRINTS Major pollen allergen Bet V1 signature 97 106 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Lele48g1030 251 PRINTS Major pollen allergen Bet V1 signature 51 71 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Lele48g1030 251 Gene3D - 49 123 IPR023393 -
Lele48g1030 251 Pfam Pathogenesis-related protein Bet v 1 family 49 109 IPR000916 GO:0006952
Lele48g1030 251 ProSiteProfiles LOB domain profile. 109 210 IPR004883 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lele48g1030 Lele-ChrLele48 15230165 15234410 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele48g1030 110 221 AS2 family AT3G26660 60.714 2.33e-49 156
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lele48g1030 LOB 7.4e-36 No_clan