Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele48g1013 ATGGCCATCTTCTTCCTTCCTTCTCATCCCATATTTCTTGCACTCATTTTCTTTTCCACCTCCATTATTGTAGCTCAATCGCGAACCGACAGTGGAACGGACTTCTCATGCCTTGCTGATTCACCACCTTCCTGTGAAACGTATGTATCATACTGTGCCCAGTCTCCAAAATATTTGAGTCTAGTGAACATATCTGATGTATTTGGGATCAGTCCTTTATCCATTGCAAGAGCTAGTAACTTATCAGATGAAGATAATAAGCTGGTTCCAGGCCAGCTCTTACTGGTTCCTGGGACTTGGGGTTGCAATGGAAACCGCTCTTTCGCCAATATAACCTACGAGATCAAGTCAGGTGATAGCTACGACCTTGTTTCATACACTGCATTTGAGAATCTCACGACTTATCATGTAGTGGAAGAGTTTAACCCTGGTACTATATTGGGATACACTCTTCTGACTGTTCTTATAATGTTGCTGGTCTATGTTTATTGTCTGAGAAAGAAAAAGATTAGTTTGAAAAAGAGTTCTTCATTTATGGAGATAGCAGATAAGCTACTTTCTGGGGTCTCAGGTTATGTAAGTAAGCCAACCATGTATGAGTTTAGTGTAATTATGGAAGCTACCATGAATTTTAATCAACAGTGCATGATTGGGGGATCAGTATATAAGGCCAAAATTGACGGGCAGGTCTTAGCAGTAAAAAAAGTGAAGGAAGATGTCATGGAGGAGCTAAAGATTCTGCAGAAGGTAAATCATGCGAATCTGGTGAAATTAATGGGCGTCTCATCAGACAACAGTTCTGGAAATTGCTTCTTGGCTTATGAATATGCTGAAAATGGATCTCTTGATAATTGGATGTACTCCATGTCTGCTTCAGAAGCAGGTTCTGGTTGTCTCATTTCTCACATGGAGCCAAAGGATCTGCATTGCCCTAGACAGGATGAGAAGAAGAAAGAGGAGAGACTCAGAAAATGGATGGATCCTAGGCTAGGAAGCTTTTATGCCATTGATGATGCTCTAAGCTTGGCCTCCTTGGCAGTGAGTTGCACCGCAGATCAGCCTTTGTCAAGACCAACCATGGCAGAAGTTGTTCTTAGCCTCTCGTTTCTGAGTCAATCATGTCCTAACGTCACATTAGAACGATGGACTTCTCGTGGTGGGTTAGGTGAAGAAGTTCCTCAAATGAAAAGTCCCATTACAGCTCGTTGA 1209 0.4202 MAIFFLPSHPIFLALIFFSTSIIVAQSRTDSGTDFSCLADSPPSCETYVSYCAQSPKYLSLVNISDVFGISPLSIARASNLSDEDNKLVPGQLLLVPGTWGCNGNRSFANITYEIKSGDSYDLVSYTAFENLTTYHVVEEFNPGTILGYTLLTVLIMLLVYVYCLRKKKISLKKSSSFMEIADKLLSGVSGYVSKPTMYEFSVIMEATMNFNQQCMIGGSVYKAKIDGQVLAVKKVKEDVMEELKILQKVNHANLVKLMGVSSDNSSGNCFLAYEYAENGSLDNWMYSMSASEAGSGCLISHMEPKDLHCPRQDEKKKEERLRKWMDPRLGSFYAIDDALSLASLAVSCTADQPLSRPTMAEVVLSLSFLSQSCPNVTLERWTSRGGLGEEVPQMKSPITAR 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele48g1013 402 SUPERFAMILY Protein kinase-like (PK-like) 194 288 IPR011009 -
Lele48g1013 402 ProSiteProfiles LysM domain profile. 49 96 IPR018392 -
Lele48g1013 402 SMART tyrkin_6 211 367 IPR020635 GO:0004713|GO:0006468
Lele48g1013 402 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 12 143 - -
Lele48g1013 402 Pfam Protein tyrosine and serine/threonine kinase 234 289 IPR001245 GO:0004672|GO:0006468
Lele48g1013 402 Gene3D Transferase(Phosphotransferase) domain 1 273 381 - -
Lele48g1013 402 ProSiteProfiles Protein kinase domain profile. 179 402 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele48g1013 402 Gene3D Phosphorylase Kinase; domain 1 187 272 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele48g1013 Lele-ChrLele48 15135281 15137089 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele48g1013 167 373 Receptor kinase-like Gene Family AT2G33580 22.907 2.09e-06 48.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Lele48g1013 PK_Tyr_Ser-Thr 1.5e-07 CL0016