Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele48g1009 ATGGCTTGGGGTTGGGGAATTGTCCCGCGGTTTGCATTTGCAGCATGCTCTTCGGCAACACTGAATTGGTACAACGAGAGTCTCATTGTCCCTATTGGCTCTTACGCTCTCACTGCCTCTGACTGCATCAAATGCTCTTGTGACCCCATTGATCTCAGGCTGCAATGTTATCCATCTGGTTTGGCTGTTCCCTGCTTCAACTTACAGTGCAAGGATTCCAATCTTGTAATTGGCGACCAGTATGTCACATATTCCAAAACTGCCTGTAATGTCACCCAGTGTCTTTATCGTGGCCACCGAGGTGGCATGATTCTCAGAAGTGTGTCCAGAACTTCGTATCTGAAATGCCCGGAATCTCCTTGGCCATCAATAAATTTAAATCCTGCAATAACGCCATTTGGGGAACTTTCTCCATATCCCTCACCTACTCCAGTTTCTGATGCTTCAATGCACACCACTCATATTTCAATCTTCAGATTGCTCCTACTGCTCCCTTGGATTTAGGTCAAGTGATTTGCAACCAGAATCCGCCATGATCTCCGACCAGAAGCAGAAATGCTTACATGCATAGCTCGTCCAAAGAAACTCGGGCATGACTCATTGAATCAGCCCGATGAATCGGATTCTACCAACTCAAGCGCCGCCAAGAGTCAAACTACTAAATCCCTCACTTCTCAGCTCAAGGATATGGCGTTGAAGGCATCAGGAGCTTACAAGCATTGCGCCCCCTGCAACGGACCACAGACACAGAATCGACTCAGGGCCAGTATTGAGTCAGACGCGGAGTCGGATCGGTTCCGATGGTCTTACCGGCGAACGGCGAGCTCAAACTCGGCAACAACGAGGACATGGGGGAAGGAGATGGAAGCGAGGCTGAAGGGGATTTCGAGTGGGGAGGGGACGCCGAACTCTGCCAGTGGACGGCGGGTGGAGCCGGTGGTGCTGTTCGTCGAAGATAACGAACCTAAGGAGTGGGTGGCGCAGGTGGAGCCCGGCGTATTAATCACCTTTGTATCACTTCCGAGCGGAGGGAATGATTTGAAGCGAATCCGGTTCAGTCGGGAAATGTATAACAAATGGCAAGCGCAAAAATGGTGGGCAGAGAACCATGAAAGGGTCATGGAACTTTACAACGTTCAGAAGCTTAATCGCCAAGCCTTCCCTCTTCCAACACCACCAAGATCTGAAGATGAGCTCTCAAAGCTTGAATCAGCAGAAGATATCCCAGTGACACCTCCACTAACCAAAGAACGATTACCTCGTAATCTAAATCTCCCAACAGGGATTGGAACGGGATACTCATCATCAGATTCTTTTGACCATCGTTCAATGCAATCCCGCCACCATCATGACTCGGGTGGCCTCAACTCAACCCCTAAATTCTCAACCATAAGCACGGCCAAGACAGAAGCATCATCCATGGACGCCTCCATCAGAAGTAGCTCATCCAGAGAGGCTGATCCTTCAGGTGATATATCAATCAGCAATGCCAGTGATCAAGACACTGAACGGGTTGAACAGGATGAACCTGGTGTTTATCTTACTATCAGAGCATTGCCAGGTGGCAAAAGGGAGCTAAGACGAGTCAGATTCAGCCGAGAAAAATTTGGGGAGATGCATGCTAGATTATGGTGGGAAGAGAATCGAGCGAGGATACATGAACAATACTTGTGA 1674 0.4904 MAWGWGIVPRFAFAACSSATLNWYNESLIVPIGSYALTASDCIKCSCDPIDLRLQCYPSGLAVPCFNLQCKDSNLVIGDQYVTYSKTACNVTQCLYRGHRGGMILRSVSRTSYLKCPESPWPSINLNPAITPFGELSPYPSPTPVSDASMHTTHISIFRLLLLLPWIXVKXFATRIRHDLRPEAEMLTCIARPKKLGHDSLNQPDESDSTNSSAAKSQTTKSLTSQLKDMALKASGAYKHCAPCNGPQTQNRLRASIESDAESDRFRWSYRRTASSNSATTRTWGKEMEARLKGISSGEGTPNSASGRRVEPVVLFVEDNEPKEWVAQVEPGVLITFVSLPSGGNDLKRIRFSREMYNKWQAQKWWAENHERVMELYNVQKLNRQAFPLPTPPRSEDELSKLESAEDIPVTPPLTKERLPRNLNLPTGIGTGYSSSDSFDHRSMQSRHHHDSGGLNSTPKFSTISTAKTEASSMDASIRSSSSREADPSGDISISNASDQDTERVEQDEPGVYLTIRALPGGKRELRRVRFSREKFGEMHARLWWEENRARIHEQYL 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele48g1009 557 MobiDBLite consensus disorder prediction 195 226 - -
Lele48g1009 557 ProSiteProfiles BRX domain profile. 502 557 IPR013591 -
Lele48g1009 557 PANTHER PROTEIN BREVIS RADIX-LIKE 1 186 557 IPR044532 -
Lele48g1009 557 Pfam Transcription factor BRX N-terminal domain 208 244 IPR027988 -
Lele48g1009 557 MobiDBLite consensus disorder prediction 450 500 - -
Lele48g1009 557 MobiDBLite consensus disorder prediction 203 226 - -
Lele48g1009 557 MobiDBLite consensus disorder prediction 238 258 - -
Lele48g1009 557 MobiDBLite consensus disorder prediction 386 511 - -
Lele48g1009 557 ProSiteProfiles BRX domain profile. 323 378 IPR013591 -
Lele48g1009 557 Pfam Transcription factor regulating root and shoot growth via Pin3 323 377 IPR013591 -
Lele48g1009 557 Pfam Transcription factor regulating root and shoot growth via Pin3 502 556 IPR013591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele48g1009 Lele-ChrLele48 15101348 15112478 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele48g1009 185 557 Major Intrinsic Protein MIP AT1G31880 40.409 1.16e-79 253