LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele48g1005	ATGGATTCTTCGCCGGAGATACTAAACGTAAGCCCAAAACCCAGTAAGCCTCCAAAAGTTTCGACAGAGACAATATTCAAACGTAGGTCACTGTCAAGGTCGGAATTCTCGAAGCCAAAATCCAGATTATTGGAGCCGCCATATCCTCAGAAAGACCCCAAATTTCTCCAAGGAAAAACTCAAATGTCAGGTTATGATTCATCAGCTAATAGGAATTCTCCGAATGTGACTTCACCTATGAACAAAAACACAACTCCAGTAACCCCACGAACGCCATTGATTGGGATGATAGAAGGAGAAGATGAAGATGAAGAAGTGTACAAAACTGCTGATCTTGAAGTGAGCAAAAGATCAGGTAAGAAAAAGTTAAAACCAATGGCTTTAATTGAATGGACTGCTTTTCTTTGCATTGTGGCTTCTCTGATATCAAGCTTAACAATCCATAAGCTGCAAAATACATTAATTTGGAGTCTGCATCTAAGGAAATGGTGCGCTTTAGTGTTGGTGATTATCTGTGGTAGAATAATCACAGAATGGTTCATCAACATTCTGGTTTTCTTGTTTGAGAGGAACTTCATATTCAAAAGGAAGGTTCTTTATTTTGTTTATGGGTTAAAGAAGAGTGTTCAAGCCTTCATTTGGTTAGCTTTGGTTCTTCTAACATGGTTTCTTATGTTCAATCATGGAGTTAAAAGATCAAGAAGAGCCAGAAAGATTCTGAAATACATAACAAGAGCACTTGCTTCTTGCCTCATTGGATCAGCAATATGGCTCATAAAAACATTACTCATAAAGCTACTAGCTTCTTCTTTCCAATGTACTGGATTCTTTGACAGGATTCAGGAATCAATCATTCATCAATATATTCTTCGGATTCTGTCGGGGCAGCCATCGATGGAGACTGCTGAAATGGTGGGGAAAAGGGCGAATAATACCGGTCAGCTCAGTTTTAGGACATTGAACAAGAAGAAGAAAGGAGAGAAAGAAGAGGTCATTGATGTGGACAAGTTGATGAAGATGAAGCAAGACAAGGTTTCTGCTTGGACAATGAAAGGGAGCAGTGGAAACTGGAAAGATAAAGAGGAAGTCCTCAAGAATTTGCTAGTGAAAGTTTACTTGGAACGCAAGTCACTGGTGCATTCCTTAAACGATGCAAAAACTGCTGTGGATGAGCTGAACAAGCTAGTCTCAGTGGTTGTGCTTGTAATCATCATCGTAGTGTGGCTTCTCTTAATGGGACTCCTAACAACTCAAGTGCTTGTCTTCATTTCATCTCAGCTATTACTCTCTGTTTTCATGTTTGCAAACACAGCCAAGACTCTTTTTGAAGCCATCATATTCATCTCCGTAATGCACCCTTTCGATGTCAGAGATCTCTGTGTCATCGATGGCGTACAGATGTTAGTGGAAGAGATGAATATATTGACGAGTGTTCTTAAGATATGA	1446	0.3963	MDSSPEILNVSPKPSKPPKVSTETIFKRRSLSRSEFSKPKSRLLEPPYPQKDPKFLQGKTQMSGYDSSANRNSPNVTSPMNKNTTPVTPRTPLIGMIEGEDEDEEVYKTADLEVSKRSGKKKLKPMALIEWTAFLCIVASLISSLTIHKLQNTLIWSLHLRKWCALVLVIICGRIITEWFINILVFLFERNFIFKRKVLYFVYGLKKSVQAFIWLALVLLTWFLMFNHGVKRSRRARKILKYITRALASCLIGSAIWLIKTLLIKLLASSFQCTGFFDRIQESIIHQYILRILSGQPSMETAEMVGKRANNTGQLSFRTLNKKKKGEKEEVIDVDKLMKMKQDKVSAWTMKGSSGNWKDKEEVLKNLLVKVYLERKSLVHSLNDAKTAVDELNKLVSVVVLVIIIVVWLLLMGLLTTQVLVFISSQLLLSVFMFANTAKTLFEAIIFISVMHPFDVRDLCVIDGVQMLVEEMNILTSVLKI	481

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele48g1005	481	MobiDBLite	consensus disorder prediction	56	90	-	-
	Lele48g1005	481	PANTHER	MECHANOSENSITIVE ION CHANNEL PROTEIN 5	26	351	IPR016688	-
	Lele48g1005	481	MobiDBLite	consensus disorder prediction	22	40	-	-
	Lele48g1005	481	MobiDBLite	consensus disorder prediction	1	92	-	-
	Lele48g1005	481	MobiDBLite	consensus disorder prediction	1	18	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele48g1005	Lele-ChrLele48	15083886	15086392	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele48g1005	352	479	Mechanosensitive Ion Channel Family	AT5G12080	50.781	1.35e-36	141