Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele48g0978 ATGGCTGCTGGGAGGCATGGAGGCTATCGCGACAACGAATTTAGGGATCGTGAGTCCAGTTTTGAAGTCTCAAGGCGGGGTTATACTAATTCTGAGGAAGATTACGATCGGATTAGGCCTAGTAGCCGCGATGGTGTGAGAGGTGGGAACACGGGTTCAAGAGACAGTATTAGATTGAGACAGAAGGATACAAGGGAGAGAGAGGCGATGAATGGCAGCTACTACTCATCTTCAAGTAGGAGTAACTCGGGGAGCAGCAGTGGTGGTCTCGGTCCCAGAAAATGTGGTTTTTCTGTCAAGGCAAGGGATAGGGAGCCAGGTGAGCTTTCCAGCGACAGCGGCTCTGATGAAGCTATTGAATCAGAACCACAGGGGAAAGGCTTTGAGGTTGCGAAGGTTGAAAAAAATGGGACTCAGTCTCCATTGGAGAGGAAAAGAAAATTTTCACCTATAGTGTGGGATCAGGATGACAAAGAAGTCAATGTTTCATCCAAACTTAAGGTGTCCACAATTTCTACTACTCTCCCTCCTCCACCACCATTACCAAAATCATTCCGTCAGTCACCTAATGCTCCATATGGTGGAGTGGAGATACATCCCGTGAACAATAGAGAAACTGAGAATCTTGAGGTGCCTACAGCAGTTAAACCACCTCTGTCCTCTGAGTCAGTTCAGGATGTTGATACTGAGTCTACTGAGAGAGCGTTTCCTTTGTCACCGGATCAAAATTTGGGCAATGATCTGGAGGCTGAGCAGCCAGAGGGTGATGAATATGTGCCTATGCATAATATATCATCTTCAAGATGGGCAGCTGGGGATAACTCTCCTGGGGATGAAGGTGAAATTATAGATGATGATGATGAGCTTTCTAAAAAGAAGAGGAGGTTGTCACCTGTGTTATTGAATACCAGAGTACGAAACAAGCTGTTGAGCCCAGATGAATCAAAAAGAGATGGCTATGAAGGAGCTAGAGCTAATTCATCTGAATCTGAAGAAAGAGGTAGCCATGGTAAAATCTCCACCGGGGATGATCATACTGTTATCGGATCTGACAAGGATGACTATATGGATATTGATGGTCAAGGTGTTAAAAGCGAAACTACTGTTAGCCACTCAGATACTGCTTCTGAAGATGAAGATGATGGACGGGAGACTCCAGAGCCTCCAACTCCACCACAAAGAGTTGTCAACATGCTCCAGGGTTGTAGAAGTGTTGATGAGTTTGAGAGACTGAACAAGATAGATGAAGGGACATATGGGGTTGTATATAGGGCCAAAGATAAGAAGACTGGGGAAATTGTAGCATTGAAGAAGGTAAAGATGGAGAAGGAAAAAGAGGGCTTCCCGCTGACTTCTCTAAGGGAAATAAATATTCTACTTTCTTTTCATCACCCATCAATAGTTGATGTTAAAGAAGTAGTTGTAGGTAGCAACCTTGATAGTATTTTTATGGTGATGGAATACATGGAACATGATCTTAAAGGACTGATGGAGGCAATGAAGCAGCCATTCAGCCAGAGTGAAGTGAAGTGCCTTATGCTCCAGCTTTTAGAAGGTGTGAAGTATCTTCATGACAACTGGGTGCTTCATAGGGACTTGAAGACTTCTAACCTGCTTTTGAATAATAGGGGTGAGTTAAAAATTTGTGATTATGGGTTGGCTCGTCAGTATGGGAGTCCATTGAAAACATACACGCATCTGGTTGTTACTCTTTGGTACAGGGCACCTGAACTTCTTCTGGGGACAAAACAGTATTCGACAGCCATTGACATGTGGTCTTTGGGTTGCATAATGGCTGAGCTATTGTCCAAAGAGCCATTATTCAACGGGAAGACTGAATTTGATCAAATTGACAAGATCTTCCGTATTCTTGGGACTCCAAATGAAACGATTTGGCCTGGGTTCTCTAAATTACCTGGAGTGAAAGTCAATTTTGTCAAGCATCAGTATAACCTTCTGCGCAAAAAATTTCCTGCCACATCATTCACTGGATCCCCAGTTCTCTCTGATTCTGGATTTGATTTGTTGAACAAGCTTCTTACTTATGACCCCGAGAAGAGGATCACGGCTGATGAAGCTCTCAATCATGAGTGGTTTCGTGAAGTTCCTCTTCCCAAGTCTAAAGAATTCATGCCTACTTTTCCTGCTCGACATGCTCAAGAGAGGCGTACTCGGAGACTATTAAAGAGTCCTGATCCTTTAGAGGAGCAGCGCCGTAAGGAGTTGCAGCAGGGTGAATTAGGGACTGGTGGTATTTTTGGCTGA 2265 0.4415 MAAGRHGGYRDNEFRDRESSFEVSRRGYTNSEEDYDRIRPSSRDGVRGGNTGSRDSIRLRQKDTREREAMNGSYYSSSSRSNSGSSSGGLGPRKCGFSVKARDREPGELSSDSGSDEAIESEPQGKGFEVAKVEKNGTQSPLERKRKFSPIVWDQDDKEVNVSSKLKVSTISTTLPPPPPLPKSFRQSPNAPYGGVEIHPVNNRETENLEVPTAVKPPLSSESVQDVDTESTERAFPLSPDQNLGNDLEAEQPEGDEYVPMHNISSSRWAAGDNSPGDEGEIIDDDDELSKKKRRLSPVLLNTRVRNKLLSPDESKRDGYEGARANSSESEERGSHGKISTGDDHTVIGSDKDDYMDIDGQGVKSETTVSHSDTASEDEDDGRETPEPPTPPQRVVNMLQGCRSVDEFERLNKIDEGTYGVVYRAKDKKTGEIVALKKVKMEKEKEGFPLTSLREINILLSFHHPSIVDVKEVVVGSNLDSIFMVMEYMEHDLKGLMEAMKQPFSQSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNRGELKICDYGLARQYGSPLKTYTHLVVTLWYRAPELLLGTKQYSTAIDMWSLGCIMAELLSKEPLFNGKTEFDQIDKIFRILGTPNETIWPGFSKLPGVKVNFVKHQYNLLRKKFPATSFTGSPVLSDSGFDLLNKLLTYDPEKRITADEALNHEWFREVPLPKSKEFMPTFPARHAQERRTRRLLKSPDPLEEQRRKELQQGELGTGGIFG 754
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele48g0978 754 MobiDBLite consensus disorder prediction 97 111 - -
Lele48g0978 754 PANTHER CELL DIVISION PROTEIN KINASE 406 705 - -
Lele48g0978 754 Pfam Protein kinase domain 408 699 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele48g0978 754 Gene3D Phosphorylase Kinase; domain 1 393 490 - -
Lele48g0978 754 MobiDBLite consensus disorder prediction 1 394 - -
Lele48g0978 754 MobiDBLite consensus disorder prediction 309 360 - -
Lele48g0978 754 SMART serkin_6 408 699 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele48g0978 754 MobiDBLite consensus disorder prediction 138 163 - -
Lele48g0978 754 FunFam Cyclin-dependent kinase G-2 491 730 - -
Lele48g0978 754 SUPERFAMILY Protein kinase-like (PK-like) 400 705 IPR011009 -
Lele48g0978 754 ProSitePatterns Serine/Threonine protein kinases active-site signature. 528 540 IPR008271 GO:0004672|GO:0006468
Lele48g0978 754 MobiDBLite consensus disorder prediction 8 43 - -
Lele48g0978 754 MobiDBLite consensus disorder prediction 70 89 - -
Lele48g0978 754 MobiDBLite consensus disorder prediction 718 754 - -
Lele48g0978 754 ProSiteProfiles Protein kinase domain profile. 408 699 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele48g0978 754 MobiDBLite consensus disorder prediction 218 239 - -
Lele48g0978 754 CDD STKc_CDC2L1 402 699 IPR045267 GO:0004674|GO:0005524|GO:0006468
Lele48g0978 754 MobiDBLite consensus disorder prediction 718 743 - -
Lele48g0978 754 Gene3D Transferase(Phosphotransferase) domain 1 491 729 - -
Lele48g0978 754 FunFam cyclin-dependent kinase G-2 isoform X1 393 490 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele48g0978 Lele-ChrLele48 14863685 14866629 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele48g0978 399 745 Core Cell Cycle Gene Families AT5G10270 44.533 2.31e-95 304
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-PITSLRE Lele48g0978 Pkinase 2.5e-75 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele48g0978 48 14863685 14866629 Lele48g0978 48 14863685 14866629 ECH
Lele45g0486 45 3773765 3776716 Lele48g0978 48 14863685 14866629 hybridization
Lele46g0511 46 3528769 3531719 Lele48g0978 48 14863685 14866629 hybridization