Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele48g0968 ATGTATTTATCGGAGAAACCCCGACCAATTGATTTCTACAAAGAAGAAGCAACCCCAGATATGATGATCGAGGTTGCGTCCAATGCCGAACTTCCTCCTCCGCCGCTGCCACTTCAACAGCTTCCGCAACATCAAATGATCCTCGGCGAAAGTAGCGGCGAGGACCACGAGGTTGAAATTAAGGCGCCAAAGAAGCGCGCTGAGACTTGGATACAAGACGAAACGCGAAATCTCATTGCTTTTCGACGTGAGATGGATGGGCTGTTTAATACCTCCAAATCTAATAAGCACTTGTGGGAACAGATATCGGCGAAGATGAGAGATAAGGGATTTGATCGATCGCCGACTATGTGTACGGATAAGTGGAGAAATCTGCTAAAGGAATTCAAGAAGGCGAAGCATCAAGATAGGGGAGCTGGGTCCGCTAAGATGTCGTATTACAAAGACATTGAGGAGATTTTGAAAGAGAGGAGCAAGAGTGTTTGCTACAAGAGCCCTACTCCTCCAAAGGTTGAATCCTATATGCAATTCTCGGATAAAGGTATGGAGGATACCAGCATTTCTTTTGGGCCTGTTGAAGCCACTGGCAGATCAACAGTCAATCTTGAAAACCGTTTGGATCATGATGAACATCCTCTTGCAATTACTGCAGCTGATACTGGTTGCACAAGTGAAGTTCCTCCTTGGAGTTGGAGAGAAACTCCTATAAGCGGTGGGGAAGGTCAGTCATGTTGTGGGAGGGTCATAACAGTCAAATGGGGTGATTACACAAGAAGAATAGGCATTGATGGTACTTCAGAAGCCATCAAAGAGGCAATAAGAGCTGCTTTTAGGTTGAGAAGCAAACGTTTGTTTTGGTTGGAGGATGAATACCAGATAGTAAGGAGCCTTGACCGAGATATGCCTTTAGGAAATTATACTCTTCACCTTGATGAAGGAATGGCCATTAAAGTATGCCTCTATGATGAGTCTGACCAAATTCATGTTCATACTGAAGAGAAGATCTTTTACACCGAAGAAGATCACCGTGATTTTCTGGCCCGGCGGGGCTGGACATGTCTGAGGGAACTTGATGGATATAGAAACATCGATAACTTGGATGATCTTCAACCTGGTGTCATGTACCGTGGTGTGAGTTGA 1140 0.45 MYLSEKPRPIDFYKEEATPDMMIEVASNAELPPPPLPLQQLPQHQMILGESSGEDHEVEIKAPKKRAETWIQDETRNLIAFRREMDGLFNTSKSNKHLWEQISAKMRDKGFDRSPTMCTDKWRNLLKEFKKAKHQDRGAGSAKMSYYKDIEEILKERSKSVCYKSPTPPKVESYMQFSDKGMEDTSISFGPVEATGRSTVNLENRLDHDEHPLAITAADTGCTSEVPPWSWRETPISGGEGQSCCGRVITVKWGDYTRRIGIDGTSEAIKEAIRAAFRLRSKRLFWLEDEYQIVRSLDRDMPLGNYTLHLDEGMAIKVCLYDESDQIHVHTEEKIFYTEEDHRDFLARRGWTCLRELDGYRNIDNLDDLQPGVMYRGVS 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele48g0968 379 ProSiteProfiles Myb-like domain profile. 62 126 IPR001005 -
Lele48g0968 379 CDD GT1 68 133 - -
Lele48g0968 379 SMART sant 66 128 IPR001005 -
Lele48g0968 379 FunFam trihelix transcription factor GT-1 70 132 - -
Lele48g0968 379 Gene3D - 70 132 - -
Lele48g0968 379 PANTHER FI21293P1 49 354 - -
Lele48g0968 379 Pfam Myb/SANT-like DNA-binding domain 69 153 IPR044822 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele48g0968 Lele-ChrLele48 14787570 14791697 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele48g0968 20 378 Trihelix Transcription Factor Family AT3G25990 68.378 1.23e-178 499
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Lele48g0968 Myb_DNA-bind_4 1.1e-19 CL0123