Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele48g0954 ATGGCGACTCTTCTGCTTTTCGCGCCGAATGCAACCTCTTCTTCTTTCTCTTACCGGCCGACCTCGACGACCAGCCCTCTTCTTCATCGACCTTACCAACACACCAATCTCTTCCATTCCAGGAACTTCCCGAGCCGTTCGCTTTCCGTCACCAGGTTCGCCTTCAAGCCTGGTTTCCTACCGGAACCTCATGGCGCCGAGGAGCTGGTCAAGGACTTGCTTACTCGGGCTGACGCTTTTCTATACACTATTGCCGATTCTGCGGTTTCATCTTCCGATACTGTGGCTACTACCGCCAAACAGAACAACGACTGGCTTTCTGGTATTACCGGTTACATGGAGAGCGTTCTCAAGGTACTGAAGGATGGGCTTTCTGCCGTGCACGTACCATATGCTTATGGTTTTGCCATTATACTCCTTACAATTCTCGTTAAGGCTGCTACATTTCCATTGACAAAGAAACAGGTAGAATCTTCCTTGGCTATGCGATCTTTGCAACCTCAAATAAAGGCTATTCAGCAACGTTATGCTGGTGATCAGGAAAGGATCCAACTTGAGACTGCTCGGTTATATAAATTGGCTGGCATTAATCCTCTAGCAGGGTGTCTTCCTACACTTGCAACAATACCTGTATGGATTGGGCTATATAGAGCACTTTCAAATGTGGCTGATGAGGGTTTCTTCTGGATACCTTCCCTCGCTGGCCCAACTACAATTGCTGCCCGTCAAAATGGAAGCGGTATCTCTTGGCTTTTTCCTTTTGTGGATGGTCACCCACCCCTTGGATGGTCAGATACATTGGCCTACCTTGTGTTGCCTGTATTGCTGGTTGTGACACAGTACATTTCTGTCCAAATAATGCAGTCATCACAGCCTAATGATCCCAACATGAAGAGTTCTCAGGCCCTAACTAAGATCCTTCCTTTAATGATTGGTTACTTTGCTCTGTCAGTGCCTTCTGGTTTAAGTCTTTACTGGTTTACAAATAATATATTGAGCACAGCACAACAAGTATGGCTTCAAAAACTTGGAGGGGCCAAAAACCCAGTGATACAAGTACGTGATGATACAGTGAATGACAATTTAAAGCAAATTCAGAAGTCAGTTTCTGAGCTAAATCCCCCTAAAAGAGAGGCCAGTCTAGGTGAGAAGTCGACATCAGAAGGGCCAAAACCAGGTGACAGATTTAAGCTAATAAAGGAGCAAGAGGCAAAGAAAAGACGACAGAGAGAAGAAGAGAAAAGGAAAGCTGAGGAGGCAGCAGCTAAAGCAACTGAAGTACACGAGGCAAGGGACAAAACAGTTCAGGTGGGAAATGAGGATGCAGATGATGGAATTGCTGTAAAATCTGATACTGTGACCATGAATGATGATCCTTCTACTTCTGGTATTGCTGTGAATGGCAATGCATCCAGTTCATTGCATACAGAAAATAAAGGTTCTGCTGATTTCCAGTTCAATGAAAGTAGTGAGAAAAGTCTAGAGAAGGAAACAGAAGTATACACACCTGCTGCTACAGAAAGCAAGACTCCTGCTGAAGACCCAGATCAAGTGACAAAGGATTGA 1566 0.4515 MATLLLFAPNATSSSFSYRPTSTTSPLLHRPYQHTNLFHSRNFPSRSLSVTRFAFKPGFLPEPHGAEELVKDLLTRADAFLYTIADSAVSSSDTVATTAKQNNDWLSGITGYMESVLKVLKDGLSAVHVPYAYGFAIILLTILVKAATFPLTKKQVESSLAMRSLQPQIKAIQQRYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGFFWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTLAYLVLPVLLVVTQYISVQIMQSSQPNDPNMKSSQALTKILPLMIGYFALSVPSGLSLYWFTNNILSTAQQVWLQKLGGAKNPVIQVRDDTVNDNLKQIQKSVSELNPPKREASLGEKSTSEGPKPGDRFKLIKEQEAKKRRQREEEKRKAEEAAAKATEVHEARDKTVQVGNEDADDGIAVKSDTVTMNDDPSTSGIAVNGNASSSLHTENKGSADFQFNESSEKSLEKETEVYTPAATESKTPAEDPDQVTKD 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele48g0954 521 PANTHER OXA1 86 417 IPR001708 GO:0016020|GO:0032977
Lele48g0954 521 MobiDBLite consensus disorder prediction 377 447 - -
Lele48g0954 521 Coils Coil 399 430 - -
Lele48g0954 521 Pfam 60Kd inner membrane protein 133 342 IPR001708 GO:0016020|GO:0032977
Lele48g0954 521 MobiDBLite consensus disorder prediction 367 521 - -
Lele48g0954 521 TIGRFAM yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 133 342 IPR028055 -
Lele48g0954 521 MobiDBLite consensus disorder prediction 453 488 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele48g0954 Lele-ChrLele48 14654887 14659162 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele48g0954 60 414 Chloroplast and Mitochondria Gene Families AT2G28800 55.402 9.20e-132 388