Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele48g0940 ATGTTCTTCGTGAAGGGTTTTACAGGAACCCTATCAATTCGGTCACTCTATAGTCTTTTTCAACACGTTTCATCATCATCAACCTTCGCTTCCATGTACAGCACAGCCGCATCTGCACCCACTCCAGAGAAAATGCCTTTCACAGTGGACTACCTCATTAGCAAATGTGGATTCTCCCGAGCAACCGCATCGGAGATTTCCCAGCGCGTCTCTCTCAAGTCATCGGAAAAATCAGACTTCGTTTTCACCCTTTTCAGAAGCTGTGGTTTTACCAACTCGCAGATTTGTAATGTCATCAAGAAAGTACCGAAATTACTTTTGAGTAATCCTGGGAAAACCATTTGGTTTAAGCTTGATGTCTTACTATCCAAAGGTGCGTCTTGCTCTCAACTTGTGGACATTGTGACCAGAAGCCCTCGATTCTTATTGAGAAGATTAGAGAATCATCTAATACCTAGATATAATTGTGTCAAAGGCTTTGTTGCATATTATCAAAGGACTATCACCTCAATCACGCATAGTCCTAGAATAATTTGTTGTGATTTACTGGAAACTAACGTCCAACTCTTTCTTGACATTGGAGTGCCCAAATCTCGCATTGCTGGATTGCTTCATGTGTGGCCTAGCTTGTTTACTATGAATTTAGTTAAATTTAGAGTGGCAGTTGAGGGATTAAAGGATAGAGGTTTTGACCCTTCAAAATCAAAATTCATTCCTGCATTGGATGCCACAAGTTAA 738 0.4079 MFFVKGFTGTLSIRSLYSLFQHVSSSSTFASMYSTAASAPTPEKMPFTVDYLISKCGFSRATASEISQRVSLKSSEKSDFVFTLFRSCGFTNSQICNVIKKVPKLLLSNPGKTIWFKLDVLLSKGASCSQLVDIVTRSPRFLLRRLENHLIPRYNCVKGFVAYYQRTITSITHSPRIICCDLLETNVQLFLDIGVPKSRIAGLLHVWPSLFTMNLVKFRVAVEGLKDRGFDPSKSKFIPALDATS 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele48g0940 245 Pfam mTERF 84 231 IPR003690 GO:0003690|GO:0006355
Lele48g0940 245 PANTHER CGI-12 PROTEIN-RELATED 46 243 IPR003690 GO:0003690|GO:0006355
Lele48g0940 245 SMART mt_12 201 231 IPR003690 GO:0003690|GO:0006355
Lele48g0940 245 SMART mt_12 168 196 IPR003690 GO:0003690|GO:0006355
Lele48g0940 245 SMART mt_12 132 163 IPR003690 GO:0003690|GO:0006355
Lele48g0940 245 SMART mt_12 96 127 IPR003690 GO:0003690|GO:0006355
Lele48g0940 245 Gene3D Transcription termination factor 3, mitochondrial 48 180 IPR038538 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele48g0940 Lele-ChrLele48 14541615 14542352 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Lele48g0940 mTERF 2.1e-16 No_clan