Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele48g0934 ATGGGTGGGTGTTTTCCTTGCTTTGGATCATCAAACAAGGACAAAGGGTTGAAGGAAGTAGCAGTCAAGAAGGATTCCTTTAAAGAAGGTCCAATTGTTGCTAAGTCTAACCACACTAATAGGGTTAGCTCAGATAAGTCAAAATCGAAAAGTGGCTCTGATCCTAAGAAGGAACCACCTGTTCCCAAGGAAGCAACAGCCCATATTGCTGCACAAACATTCACATTCCGAGAACTTGCAGCTGCTACAAATAATTTTAGGCCAGAATGCTTATTAGGTGAAGGAGGTTTCGGACGTGTCTACAAAGGTCGTCTTGAGAGCACGAGACAAGTAGTTGCTGTGAAACAGCTTGATCGCAATGGCCTTCAAGGAAATCGAGAATTCTTGGTGGAGGTTCTCATGCTTAGCCTCTTGCATCATCCCAATCTTGTCAACTTAATTGGTTATTGTGCTGATGGTGATCAGAGGCTTCTTGTTTATGAATTTATGCCATTGGGCTCCTTAGAGGATCATTTACATGATCTTCCTCCTGACAAGGATCCTCTAGACTGGAACACGAGAATGAAAATTGCTGCGGGTGCTGCTAAGGGATTGGAATATTTGCATGACAAAGCAAATCCCCCTGTTATTTACAGAGACTTAAAGTCATCCAACATCCTCCTCGATGAGGGCTATCATCCCAAGTTATCAGATTTTGGGCTTGCGAAGCTCGGTCCTGTTGGTGACAAGACTCATGTATCTACACGGGTAATGGGTACATACGGGTACTGTGCTCCAGAGTATGCCATGACAGGCCAACTCACTCTGAAGTCTGATGTATATAGCTTTGGAGTTGTCTTTCTTGAACTTATTACAGGGCGCAAAGCTATTGACAATACCCGTGCCCCCGGAGAGCATAATCTCGTTGCTTGGGCACGGCCTCTTTTTAAAGACCGTAGGAAGTTTCCAAAAATGGCTGATCCCCTACTTCAAGGGCATTACCCGATGCGAGGACTCTACCAAGCACTTGCAGTTGCAGCCATGTGTTTGCAGGAACAAGCTGCTACAAGGCCTCTTATTGGGGATGTTGTGACTGCTCTCACATACTTGGCCTCACAGGCGTATGACCCAAATGCAACCAGTCAGAGTAGTAGAGTTGGTTCATTGACCCCGAGGAGCAGGGATGGCCGAAGGAGCATGACAGATGGTGTTATGGATAGCCCTGATCATGGACAAAGTGGCTCCCCTTCCACTCATAAGAACTCACCCGATGTCCAGAGGAGAGATAGTGTTGGGAAAGATTTAGGCAGGAGTGAAACTGGGTCAGGAAGAAGATGGGGATTGGATGATGTAGAAAGGCTGGAATCTCAGAGAGACAGCCCTGTAAATACCGGGAGAGCTAGGGAAACTCCAAGGAACCGTGACCTAGACAGAGAACGCGCGGTTGCAGAAGCAAAAGTATGGGGCGAGAATTGGAGAGAGAAGAAGAGGGCTAACGCAGTGGGTAGCTTTGATGCTACAAATGAGTAG 1509 0.4672 MGGCFPCFGSSNKDKGLKEVAVKKDSFKEGPIVAKSNHTNRVSSDKSKSKSGSDPKKEPPVPKEATAHIAAQTFTFRELAAATNNFRPECLLGEGGFGRVYKGRLESTRQVVAVKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKDPLDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDLKSSNILLDEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLTLKSDVYSFGVVFLELITGRKAIDNTRAPGEHNLVAWARPLFKDRRKFPKMADPLLQGHYPMRGLYQALAVAAMCLQEQAATRPLIGDVVTALTYLASQAYDPNATSQSSRVGSLTPRSRDGRRSMTDGVMDSPDHGQSGSPSTHKNSPDVQRRDSVGKDLGRSETGSGRRWGLDDVERLESQRDSPVNTGRARETPRNRDLDRERAVAEAKVWGENWREKKRANAVGSFDATNE 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele48g0934 502 Gene3D Transferase(Phosphotransferase) domain 1 163 381 - -
Lele48g0934 502 Gene3D Phosphorylase Kinase; domain 1 70 162 - -
Lele48g0934 502 Pfam Protein kinase domain 91 295 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele48g0934 502 ProSitePatterns Protein kinases ATP-binding region signature. 92 115 IPR017441 GO:0005524
Lele48g0934 502 CDD STKc_IRAK 92 361 - -
Lele48g0934 502 MobiDBLite consensus disorder prediction 369 383 - -
Lele48g0934 502 MobiDBLite consensus disorder prediction 28 64 - -
Lele48g0934 502 ProSitePatterns Serine/Threonine protein kinases active-site signature. 209 221 IPR008271 GO:0004672|GO:0006468
Lele48g0934 502 SUPERFAMILY Protein kinase-like (PK-like) 64 360 IPR011009 -
Lele48g0934 502 SMART serkin_6 86 363 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele48g0934 502 PANTHER OS07G0668900 PROTEIN 28 372 - -
Lele48g0934 502 FunFam Serine/threonine-protein kinase PBS1 61 162 - -
Lele48g0934 502 ProSiteProfiles Protein kinase domain profile. 86 363 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele48g0934 502 MobiDBLite consensus disorder prediction 369 472 - -
Lele48g0934 502 MobiDBLite consensus disorder prediction 415 452 - -
Lele48g0934 502 FunFam Serine/threonine-protein kinase PBS1 163 378 - -
Lele48g0934 502 MobiDBLite consensus disorder prediction 41 63 - -
Lele48g0934 502 MobiDBLite consensus disorder prediction 399 414 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele48g0934 Lele-ChrLele48 14496405 14500521 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele48g0934 4 365 Glycoside Hydrolase AT3G07070 65.301 2.64e-171 487
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Lele48g0934 Pkinase 2.2e-45 CL0016