Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele48g0920 ATGTTCCTCAGATTTGATTTTTGTGCTGATCTATCTCCCCTCCCTCCATCCCCTTCCCTAAAGTGTGGAAAAAGAGGGGAAGGTGTTGTTCATTACCAACTCTGCAATTGTGCTGCTAATGCTATACTGAGTCTGCATGCTCAATCTGAATGTGAGCATTGTACATTTTGGGGAACTGGTGTGGAGCTAAGGTTTCAGAATCTTTATTTTTTGATGGACTGCAATAGAGAAGAGGCCTTAAGAGCCAAGGATGTTGCAGAAAAGAAGATGGAAAACAAAGATTTCACAGGGGCCCGTAAAGTTGCTATAAAGGCTCAGCAACTATTTCCTGATCTGGAGAATATAGCTCATATGCTTATTGTTTGTGATGTTCATTGCTCCGCGGAGAAGAAATTTTGCAATGAAAGGGACTGGTATGGAATTCTTCAAGTAGAGCAGACAGCTGATGAAGCCACGATAAGGAAGCAATACAGGAAGTTTGCCCTCCTACTTCATCCTGATAAAAACAAGTTTGCTGGTGCTGAAGCTGCATTTAAGCTGGTAGGGGAAGCTCAGGCAGTGCTTTTAGACAGACAGAAACGGGCTGCACATGACAGAAACAGAACTTCGTATTGTCCACCCCGGAATATTTTTGTGAATGTTGATACTGGGGTGCAAAACCATATTAGGACCAATTTCACAAACTCAAATCCTCAGCAGCATCAGTCGAGTCAGTCAGCAGCTCAGCAGGGGTTTAATGATGGCTCCTCTACATTTTGGACTGTTTGCCCATTTTGTTCTATTAGATTTCAATATTACTTAGAAGTTCTTAATAGATCTCTGCGTTGTCAAAGTTGCAACAGGCCCTTTGTTGCATATGACATCAGTGCGCAAGGTATAGTTCCACCAGCTTATTCAGGTCCACAATCTTTTGTGCAGCCTAAAGATGGTCCTAATCATCACTCATTTAAGGTGGACGTTGGATCTCAAGGTAAATCACGTGGTAGAAATGTCAATACAAAACCTTTTGATAAGAAAGTCCATACTTCCCATGTCTCTAGAAAGCTTAATGGAAAACGGCAGAGGGGGCAAGTAGTGGAAATTAGTGAAAGTTCTGATTCCATACACAGCTCTGATTCTGAAAGTGATATGGCTTCTGATGATATCATTTCTGATGAGGATGGTATTTCTAGCCAACTAAACCATGCCACTTCTAGGGAAGAGAATGCTCGTAGATCTACACGGAAAAAACAGCAGGTTTCCTACAAGGAGAAGGCAAGTGATGATGATGATGATGGCATAAATGCTTTAAAAAGGGCGAATGGTTTGGCTGATGATCTAGAATATCATGAGAAAGAGTTAAAGCAGAAGCAGAAGCATGGTGTTTTTCCTGAAGACATATTACCCGATTCAGTGGAAGGTTCAAAGATGACTGCTAAAGTTAGTGAGCCTGATTCAGCCTGCAACGTAACAGAGCAGCCTAATATTATAGTCTGCCCTGATGCAGAGTTTAATGACTTCGACAAGGACAAGAAGAAAGATTGTTTTGCAGTTGGGCAGGTTTGGGCTGTTTATGATACAAATGATGGCATGCCTAGATTCTATGCTCTAATTAAAAAAGTTTTCTCCTCTGAGTTCAAGCTGCGAATAACATGGTTTGAACCAGAACCGAGTGATGGGGATGAAATTAATTGGGTAGACAAGCAATTGCCAGTTGCTTGTGGAAAGTATGGGCTTAGACACTCTGAAACTACAGAAGACTATCCCATGTTTTCTCATCGAGTTCTGTATGAAAAAATTGGAAGTAATACTTTTAAAGTTTATCCTAGAAAAGGAGAAACCTGGGCTTTCTATAAAAATTGGGATATCAAATGGTACATGGACGTGGAATCTCATCAGAAATATGAATTCGAGTTTATCGAAATCTTGACTGACTATGTTGAAGGTGAGGGTGTATTTATTGCATACTTGGTTAAATTGAAAGGTTTCGTGAGTCTCTTCTCTAGAGTTATGAAGGGAGGCGCCTACCCAATTAAAATTCCATCAGCAGAGTTATTCAGATTCTCTCACAGGGTTCCATCTTTTAAAATGACTGGTAAGGAAAGAGTAGGTGTTCCTGCAGGATCTTGGGAACTTGATCCCGCGGCTCTGCCTTCAAATCTCGAAGAGGTTGCTGTTCCCAATGATTTGGAAGTGAAGGCTGGACATTCCCCATCCGGTGATGTGAGTAGAAGATCTTCAGATAGATTGAAGCCCAAGATGGCACCTGATGGAGATTTACATGCTTTCCAGGCTAATTTTGAAACAAGAAATTCGGCAAAGAACAATGGTTCAGCTAACCATGTTGAAGATTGTAGCGCTCCATTGTCTTCAACCCCAGAAACTATGGAAATTCCAGATCCTCAGTTCTACAATTTTGACGATGGGAAGGCCCCAGAGAAGTTTCAGGTTGGTCAGATTTGGGCATTTTATAGTGACGAAGATGGCCTACCAAGGTACTATGGTGAGATTACAGAAATCAGGCGGGGCCCAGGTCTTGAATTGCATGTTATGTGGCTTGCTTCCTGTTGGCTTCCAGATCACACTATTAGATGGGAAGGCAAAGATATGCTTATCTCCTGTGGCAGGTTTAAAAGTAGAAATGGGAATACAAATGTTTATACTAACACCCTCTCCCTTTCACATCAGGTACTCGTTAATTTTGACAGAAATAACGATGAATATTCCATCTTTCCAAGGAAAGGTGAAGTTTGGGCATTATATAGGAAATGGTCACGTAAAATCAAATGCTCCGATCTGGTAAACTGGGAGTATGACATAGTGGAAATTATTGAAGAAAATGCCTCTTGGATTGAAGTTTTAGTCATGGAGATTGTCAGAGGATATAATTCAGTTTTCAAGCCGAAAACATTTGAAGGATCAGCCATCACCATGAGAGTACCCCTGGCACAGTTGCTCAGGTTCTCCCACCAAATCCCAAAATTCAAACTTACAGAGAAGCATGGCAAGCTGAAAGGCTTCTGGGAGCTTGATCCAGGAGCCGTGCCCGTCCACTTTTGGACTTCACAGTAG 3051 0.4163 MFLRFDFCADLSPLPPSPSLKCGKRGEGVVHYQLCNCAANAILSLHAQSECEHCTFWGTGVELRFQNLYFLMDCNREEALRAKDVAEKKMENKDFTGARKVAIKAQQLFPDLENIAHMLIVCDVHCSAEKKFCNERDWYGILQVEQTADEATIRKQYRKFALLLHPDKNKFAGAEAAFKLVGEAQAVLLDRQKRAAHDRNRTSYCPPRNIFVNVDTGVQNHIRTNFTNSNPQQHQSSQSAAQQGFNDGSSTFWTVCPFCSIRFQYYLEVLNRSLRCQSCNRPFVAYDISAQGIVPPAYSGPQSFVQPKDGPNHHSFKVDVGSQGKSRGRNVNTKPFDKKVHTSHVSRKLNGKRQRGQVVEISESSDSIHSSDSESDMASDDIISDEDGISSQLNHATSREENARRSTRKKQQVSYKEKASDDDDDGINALKRANGLADDLEYHEKELKQKQKHGVFPEDILPDSVEGSKMTAKVSEPDSACNVTEQPNIIVCPDAEFNDFDKDKKKDCFAVGQVWAVYDTNDGMPRFYALIKKVFSSEFKLRITWFEPEPSDGDEINWVDKQLPVACGKYGLRHSETTEDYPMFSHRVLYEKIGSNTFKVYPRKGETWAFYKNWDIKWYMDVESHQKYEFEFIEILTDYVEGEGVFIAYLVKLKGFVSLFSRVMKGGAYPIKIPSAELFRFSHRVPSFKMTGKERVGVPAGSWELDPAALPSNLEEVAVPNDLEVKAGHSPSGDVSRRSSDRLKPKMAPDGDLHAFQANFETRNSAKNNGSANHVEDCSAPLSSTPETMEIPDPQFYNFDDGKAPEKFQVGQIWAFYSDEDGLPRYYGEITEIRRGPGLELHVMWLASCWLPDHTIRWEGKDMLISCGRFKSRNGNTNVYTNTLSLSHQVLVNFDRNNDEYSIFPRKGEVWALYRKWSRKIKCSDLVNWEYDIVEIIEENASWIEVLVMEIVRGYNSVFKPKTFEGSAITMRVPLAQLLRFSHQIPKFKLTEKHGKLKGFWELDPGAVPVHFWTSQ 1016
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele48g0920 1016 MobiDBLite consensus disorder prediction 398 429 - -
Lele48g0920 1016 MobiDBLite consensus disorder prediction 223 243 - -
Lele48g0920 1016 SMART dnaj_3 136 193 IPR001623 -
Lele48g0920 1016 MobiDBLite consensus disorder prediction 299 429 - -
Lele48g0920 1016 PANTHER DNAJ HEAT SHOCK AMINO-TERMINAL DOMAIN PROTEIN-RELATED 72 759 - -
Lele48g0920 1016 ProSiteProfiles dnaJ domain profile. 137 201 IPR001623 -
Lele48g0920 1016 Pfam DnaJ domain 137 198 IPR001623 -
Lele48g0920 1016 Gene3D DnaJ domain 133 255 IPR036869 -
Lele48g0920 1016 MobiDBLite consensus disorder prediction 764 789 - -
Lele48g0920 1016 Pfam Domain of unknown function (DUF3444) 786 993 IPR024593 -
Lele48g0920 1016 Pfam Domain of unknown function (DUF3444) 488 694 IPR024593 -
Lele48g0920 1016 MobiDBLite consensus disorder prediction 723 749 - -
Lele48g0920 1016 CDD DnaJ 137 190 IPR001623 -
Lele48g0920 1016 MobiDBLite consensus disorder prediction 735 749 - -
Lele48g0920 1016 PRINTS DnaJ domain signature 173 193 IPR001623 -
Lele48g0920 1016 PRINTS DnaJ domain signature 157 172 IPR001623 -
Lele48g0920 1016 PRINTS DnaJ domain signature 139 157 IPR001623 -
Lele48g0920 1016 SUPERFAMILY Chaperone J-domain 127 202 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele48g0920 Lele-ChrLele48 14390371 14394371 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele48g0920 75 310 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 35.178 1.73e-30 122