Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele48g0912 ATGTATGGTTTAGTAGACGAAAAGACCGATGTCTATGCTTATGGGGTGCTATTATTGGAGCTCATTACTGGACGACAAGCTTTGGATAGCTCACAGAAAAGTTTAGTGATGTGGGCAAAACCTTTTCTATCTACAAATAACATTAAAGAGCTCGTCGATCCATGTCTCAATGGCGCTTATGATGAAGAACAAATGAAACTTGTAGTCTTAGTAGCTTCAATGTGTGTTGATCAATCTTCAGCTGAACGACCAAACATGAGCCAGGCAATGAAGATTCTAAGGGGAGAAGAAGATAGCTTGGAGCTCATGAAATTGCGCTCCAAGTCCAAAATTCAAAGGACACCCTCTGAAGAGGAACTCCTAGATGCAGATGAGTACAACTCAACCGAGCTTTTGAATGACACAGATCCACATGTGGAGACTCTTCTGGGAAACTGTAACTCTAATGAACAGGATTCACAACTAGAGCAAGGGCAATGA 480 0.4167 MYGLVDEKTDVYAYGVLLLELITGRQALDSSQKSLVMWAKPFLSTNNIKELVDPCLNGAYDEEQMKLVVLVASMCVDQSSAERPNMSQAMKILRGEEDSLELMKLRSKSKIQRTPSEEELLDADEYNSTELLNDTDPHVETLLGNCNSNEQDSQLEQGQ 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele48g0912 159 PANTHER OS08G0249100 PROTEIN 1 128 - -
Lele48g0912 159 Gene3D Transferase(Phosphotransferase) domain 1 1 119 - -
Lele48g0912 159 SUPERFAMILY Protein kinase-like (PK-like) 4 102 IPR011009 -
Lele48g0912 159 MobiDBLite consensus disorder prediction 107 136 - -
Lele48g0912 159 ProSiteProfiles Protein kinase domain profile. 1 100 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele48g0912 Lele-ChrLele48 14313131 14314191 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele48g0912 3 102 Trihelix Transcription Factor Family AT5G38560 43.519 2.73e-20 84.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Lele48g0912 None None None