Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele48g0911 ATGAGAAGGCAAAGGCATTTGGCTTTCGAAGCAGTGACAATCATCTTCGACCAAAAACACTAAAATGTGAAGGAGGAACAAAAAGAAAGGCAGATTCCTACAAGGTCATGCAGACCAAGGAATGGGTCTTCTGATTCCATTTCAAGTAATGACTCTGTGGATCATGAGTGTTCTTCTAGGGGTGGTGATATTGAAGAATGCTCAAGCAGTTTAGAACCCAAATCTCCTCCTTCCCAGACTTCTGATTCAGAGAATCAGTCAAATAATCCCCAGTGGCATAGTTTCTTTGGTTTGTTAAAGAAAGGACCCAAAGTGCGTTTCCAACCAATTCTTCCAGTTATAAGTGTTCCCAAACTCACCAGAAGAAATAGTAAGAAATATAGGGAGAACCAGGTTCCACCTCTAAATTCACCACTGAATAATCCAGCTCTCAAGACAATCTTGGACACCGAATTGTTCTGCTTCAAAGCTTCCTGGAAAAATTTCTCTCATGCTGAGATTGTGATTGCAACTAACAATTTCAGCCATGAGAATATGATTGGTGAAGGAGGTTATGCTGTGGTTTACAAAGGCAAAATGGAAGATGGGCAATTTGTTGCAATCAAACAGCTCACAAGAGGAACTCTAGAAGAAATGACTGCAGATTTCTTGTCTGAGCTTGGAATTATAGTGCATGTGAACCATCCCAATATTGCTAGATTGATTGGATATGGTGTTGAAGGAGGAATGTTTCTTGTTCTTCAGTTGTCTCCACATGGCAGCCTAGCATCCATACTTTATGGGCCTCGAGAGAAACTAGATTGGAGCTTAAGGTATAAGATTGCTTTGGGGACTGCTGATGGCCTTCACTATCTTCATGAGGAATGCCAAAGAAGGATAATTCACAGAGATATAAAGGCTTCTAACATTTTGCTCTCAGAGGACTCTGAAGCTATGGTTAAGCCCAATACAGCAATCTGA 960 0.4094 MRRQRHLAFEAVTIIFDQKHXNVKEEQKERQIPTRSCRPRNGSSDSISSNDSVDHECSSRGGDIEECSSSLEPKSPPSQTSDSENQSNNPQWHSFFGLLKKGPKVRFQPILPVISVPKLTRRNSKKYRENQVPPLNSPLNNPALKTILDTELFCFKASWKNFSHAEIVIATNNFSHENMIGEGGYAVVYKGKMEDGQFVAIKQLTRGTLEEMTADFLSELGIIVHVNHPNIARLIGYGVEGGMFLVLQLSPHGSLASILYGPREKLDWSLRYKIALGTADGLHYLHEECQRRIIHRDIKASNILLSEDSEAMVKPNTAI 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele48g0911 319 MobiDBLite consensus disorder prediction 36 55 - -
Lele48g0911 319 Gene3D Phosphorylase Kinase; domain 1 140 248 - -
Lele48g0911 319 FunFam Receptor-like cytosolic serine/threonine-protein kinase RBK2 144 248 - -
Lele48g0911 319 Gene3D Transferase(Phosphotransferase) domain 1 251 314 - -
Lele48g0911 319 PANTHER OS08G0249100 PROTEIN 30 311 - -
Lele48g0911 319 ProSiteProfiles Protein kinase domain profile. 174 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele48g0911 319 MobiDBLite consensus disorder prediction 19 95 - -
Lele48g0911 319 SMART serkin_6 174 317 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele48g0911 319 ProSitePatterns Serine/Threonine protein kinases active-site signature. 293 305 IPR008271 GO:0004672|GO:0006468
Lele48g0911 319 MobiDBLite consensus disorder prediction 71 94 - -
Lele48g0911 319 MobiDBLite consensus disorder prediction 19 35 - -
Lele48g0911 319 Pfam Protein tyrosine and serine/threonine kinase 177 310 IPR001245 GO:0004672|GO:0006468
Lele48g0911 319 SUPERFAMILY Protein kinase-like (PK-like) 159 312 IPR011009 -
Lele48g0911 319 ProSitePatterns Protein kinases ATP-binding region signature. 180 202 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele48g0911 Lele-ChrLele48 14310804 14312828 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele48g0911 162 307 Receptor kinase-like Gene Family AT1G53420 50.000 3.28e-40 148
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Lele48g0911 PK_Tyr_Ser-Thr 8.5e-24 CL0016