Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele48g0907 ATGGGTTGTGTCCATTGCAAGTGTTGTCGCGGCTACGTTCCGCCGTCGGAATGTGGCGGTGCTAGCACCTGCCGCGGACTCGGCCCTCGCCGTCGCCAAAGGAAACACAAATTTAGTCAGAGTTCATTGAAGTTTGCTCCTGTTCCTTCCCACAACTACGTTTTAGAATACTCGTTTCTCACACAACAAGGATACTACCCTGATTCACCTGATAAAGAAAACCAAGATACTTTCTGTATTAGGACACAGGTTCAAGGTAACCCAAACATCCATTTTTTCGGTGTCTATGATGGGCATGGTCAATTTGGTAGCCAGTGTTCGAATTTTGTTGGAGATAGGTTGATAGAAACATTATCCAATGACCCTGCATTGTTGGAGGACCCCGTTAAAGCATATACTTCAGCATTCTTGGCAACGAATTACCAATTACACAACAGTGAGATTGATGATTCAATGAGTGGCACTACTGCAATTACGGTGCTTGTTGTCGGAGACACACTTTATGTTGCTAATGTTGGTGATTCCAGAGCGGTGCTGGCGGTAAAGGATGGGAATCGCGTTGTTGCTGAGAACTTATCTTCTGATCAGACACCGTTTCGAAGAGATGAATATGAAAGAGTGAGACTTTGTGGTGCAAGGGTGTTAAGTGTTGATCAGGTGGAAGGGCTTAAGGATCCTGATGTCCAAACATGGGGTGATGAAGAGAGTCAGGGAAGCGATCCTCCAAGGTTGTGGGTTCCAAATGGGATGTATCCTGGAACTGCATTTACAAGGAGTTTAGGGGATAGTTTGGCAGAGACTATTGGTGTCATTGCTGCTCCAGAAGTTTCAGTGGTTCAGCTTACATCTAATCATCTTTTCTTTATTGTGGCAAGTGATGGCATATTTGAGTTCCTATCAAGCCAAACTGTTGTTAACATGGCAGCAAGCTATACAGATCCCGGTGAAGCATGTGCTGCCATTGCTGGAGAGGCATATAAACTATGGTTGGAACATGAGAATCGAACAGATGATATAACAATTATCATCGTTCAGATCAAAGGCCTATCTAATGCAGGTACATCTGGAGTCGGACTAGATAATATTAACGTTAGTACAGCAACATGGGCAAGGAGAGGAACTTCTGAAATATCTGCTACCACTTCATCGGATGTGTATTGTTCTATGAGGAGTGAGCTCTCTGATCAGAACATAATTTCAATGAGAAGCCCAGCTATAATTGTGCCGTCTCCATCATCTCAAAGACCGGTTGAATAG 1257 0.4407 MGCVHCKCCRGYVPPSECGGASTCRGLGPRRRQRKHKFSQSSLKFAPVPSHNYVLEYSFLTQQGYYPDSPDKENQDTFCIRTQVQGNPNIHFFGVYDGHGQFGSQCSNFVGDRLIETLSNDPALLEDPVKAYTSAFLATNYQLHNSEIDDSMSGTTAITVLVVGDTLYVANVGDSRAVLAVKDGNRVVAENLSSDQTPFRRDEYERVRLCGARVLSVDQVEGLKDPDVQTWGDEESQGSDPPRLWVPNGMYPGTAFTRSLGDSLAETIGVIAAPEVSVVQLTSNHLFFIVASDGIFEFLSSQTVVNMAASYTDPGEACAAIAGEAYKLWLEHENRTDDITIIIVQIKGLSNAGTSGVGLDNINVSTATWARRGTSEISATTSSDVYCSMRSELSDQNIISMRSPAIIVPSPSSQRPVE 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele48g0907 418 CDD PP2Cc 72 346 IPR001932 -
Lele48g0907 418 Pfam Protein phosphatase 2C 79 325 IPR001932 -
Lele48g0907 418 ProSiteProfiles PPM-type phosphatase domain profile. 56 346 IPR001932 -
Lele48g0907 418 FunFam Phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein 51 348 - -
Lele48g0907 418 PANTHER PROTEIN PHOSPHATASE 59 345 - -
Lele48g0907 418 Gene3D - 44 348 IPR036457 -
Lele48g0907 418 SMART PP2C_4 48 344 IPR001932 -
Lele48g0907 418 ProSitePatterns PPM-type phosphatase domain signature. 92 100 IPR000222 GO:0043169
Lele48g0907 418 SUPERFAMILY PP2C-like 47 348 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele48g0907 Lele-ChrLele48 14280107 14282203 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele48g0907 1 351 PP2C-type Phosphatase Gene Family AT3G06270 68.056 0.0 506