Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele48g0879 ATGCTGCCTGATCAAAGAAAAAAGTCCTCTGTGGATGTGAACTTCTTCACAGAATATGGTGAAGGGAGTAGATACAGAATAGAGGAGGTAATTGGTAAAGGAAGCTATGGTGTTGTTTGCTCTGCGTTAGATGCACACACTGGGGAAAAGGTTGCAATAAAGAAAATTAATGACATATTTGAACATGTCTCTGATGCCACACGCATTCTTCGTGAGATTAAGCTTCTTAGACTCTTGCGTCACCCTGATATTGTGGAGATCAAGCATATCTTGTTACCACCTTCTAGGAGAGAATTTAAAGATATATATGTCGTGTTTGAACTCATGGAATCCGATTTACATCAGGTCATCAAAGCAAATGATGATCTGACTCCAGAGCACTATCAGTTTTTTCTTTACCAGCTTCTTCGAGGCTTGAAGTACATACACACAGCAAATGTTTTTCACCGAGACCTAAAACCAAAAAACATTTTAGCAAATGCTGACTGCAAACTCAAGATCTGTGACTTTGGTCTTGCCAGAGTAGCATTTAATGATACACCCACTGCCATATTCTGGACGGATTATGTTGCAACAAGGTGGTATAGGGCTCCTGAGCTATGTGGATCCTTTTTCTCCAAGTACACACCAGCTATAGATATATGGAGCATTGGCTGCATTTTTGCAGAACTTTTAACTGGAAAACCTCTTTTCCCAGGGAAGAATGTTGTCCATCAGTTGGACCTCATGACTGAACTTCTTGGAACACCATCTCCCGAAGCCATTGCTAGGATACGAAATGAGAAAGCTAGGAGATATTTAAGCAGTATGCGAAAGAGGAAGCCAGTTCCTTTCTCCCACAAGTTCCCTAATGCAGATCCGCTTGCTCTTCGTTTGTTGGAAAGAATGCTGGCATTTGACCCAAAAGATCGGCCTAGTGCTGAAGAGGCTTTGGCAGATCCATATTTTAAAGGTTTGGCCAAGGTTGAAAGAGAGCCTTCAGCACAGCCAGTTAGCAAGATGGAATTTGAATTCGAGAGACGCAGGATAACAAAGGAGGACATACGAGAGCTCATATATCGAGAAATTCTTGAGTACCATCCGAAGATGTTAAAGGAGTTCCTAGAGGGAGCAGAGCCAACAAGTTTTATGTATCCAAGTGCTGTAGACCACTTCAAGAAGCAATTTGCTTATCTTGAGGAGCATTATGGAAAGGGTGGAATTGTTATGCCGCCTGAGAGGCAGCATGCATCATTGCCCAGGCCATGTGTATTATATTCAGATAAATCAATACAAAGTCCAGCTGAGGTTGCAGAGGATCTCTCTAAATGCTGCATCAAAGAAGTTAAGCCACCCATAGAGAGGACCAGTGGTATCCCTTTGACTCGGCTTCCAACACAGGTTCCACAAAATATGCAAGGTGCAAGGCCTGGGAAAGTAGTTAGTTCAGTGTTGCGATACAACTGCGGGGTAGCAGCAACAGCAGAGGCGGCTTTCGAACAGCGACCAATGGCTAGAAATCCACCTGTTTCAGCCCAGCATCCTGCTTCAAGCTGTTCATATCCCAGAAGAAACCCTGGCTGTAAAAATGAGAGGGTAGAAGATGATGGAATTGAAAGTTCTAATGGGTTGCAACCAAAGCCTCAATATATGCCTAGAAAAGTTGCTGCTGCTCAAGGTGGAGCTTCTAGTCATTGGTATTGA 1683 0.432 MLPDQRKKSSVDVNFFTEYGEGSRYRIEEVIGKGSYGVVCSALDAHTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDLMTELLGTPSPEAIARIRNEKARRYLSSMRKRKPVPFSHKFPNADPLALRLLERMLAFDPKDRPSAEEALADPYFKGLAKVEREPSAQPVSKMEFEFERRRITKEDIRELIYREILEYHPKMLKEFLEGAEPTSFMYPSAVDHFKKQFAYLEEHYGKGGIVMPPERQHASLPRPCVLYSDKSIQSPAEVAEDLSKCCIKEVKPPIERTSGIPLTRLPTQVPQNMQGARPGKVVSSVLRYNCGVAATAEAAFEQRPMARNPPVSAQHPASSCSYPRRNPGCKNERVEDDGIESSNGLQPKPQYMPRKVAAAQGGASSHWY 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele48g0879 560 ProSitePatterns Protein kinases ATP-binding region signature. 31 55 IPR017441 GO:0005524
Lele48g0879 560 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 24 340 - -
Lele48g0879 560 CDD STKc_TDY_MAPK 24 361 - -
Lele48g0879 560 SUPERFAMILY Protein kinase-like (PK-like) 22 320 IPR011009 -
Lele48g0879 560 MobiDBLite consensus disorder prediction 499 560 - -
Lele48g0879 560 Gene3D Transferase(Phosphotransferase) domain 1 111 339 - -
Lele48g0879 560 FunFam Mitogen-activated protein kinase 111 339 - -
Lele48g0879 560 Gene3D Phosphorylase Kinase; domain 1 40 361 - -
Lele48g0879 560 SMART serkin_6 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele48g0879 560 ProSiteProfiles Protein kinase domain profile. 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele48g0879 560 FunFam Mitogen-activated protein kinase 14 119 - -
Lele48g0879 560 Pfam Protein kinase domain 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele48g0879 560 ProSitePatterns MAP kinase signature. 60 163 IPR003527 GO:0004707|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele48g0879 Lele-ChrLele48 14121200 14126673 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele48g0879 1 560 MAP Kinase Gene Family AT5G19010 78.571 0.0 914
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Lele48g0879 Pkinase 2.4e-68 CL0016