Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele48g0878 ATGAAATTGCAATTCATGATCTTGTTAATCCGATCTGGTGGTGTTACTTGTGTGGTTCGGAGAGTGGGTGTTTGCTGGTTGTTTGTATTGTTGTCACATTACCTCTTGATGTTGTATTGCGTATTGATGACAATGGTGAGAGTTAGTGTCTTAAATGATGCTCTGAAGAGTATGTACAATGCTGAGAAAAGGGGGAAACGTCAGGTCATGATTAGGCCATCCTCAAAAGTGATCATTAAATTTCTTTTGGTGATGCAGAAGCATGGGTACATTGGAGAGTTTGAGTATGTTGATGATCACAGGGCTGGGAAAATTGTTGTGGAGTTAAATGGAAGGTTGAATAAATGTGGTGTTATTAGTCCCCGTTTTGATGTGGGTGTAAAGGATATAGAACCTTGGACTGCAAGGCTACTTCCCTCAAGACAGTTTGGCTATATTGTCTTGACGACCTCTGCCGGTATTATGGATCATGAAGAGGCTAGGAGAAAGAATGTTGGTGGTAAAGTGTTGGGTTTCTTTTACTAG 525 0.4076 MKLQFMILLIRSGGVTCVVRRVGVCWLFVLLSHYLLMLYCVLMTMVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKDIEPWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele48g0878 174 FunFam 40S ribosomal protein S15a 45 113 - -
Lele48g0878 174 Pfam Ribosomal protein S8 51 174 IPR000630 GO:0003735|GO:0005840|GO:0006412
Lele48g0878 174 Gene3D - 45 113 - -
Lele48g0878 174 FunFam 40S ribosomal protein S15a 114 174 - -
Lele48g0878 174 ProSitePatterns Ribosomal protein S8 signature. 144 161 IPR000630 GO:0003735|GO:0005840|GO:0006412
Lele48g0878 174 Gene3D - 114 174 - -
Lele48g0878 174 SUPERFAMILY Ribosomal protein S8 48 174 IPR035987 GO:0003735|GO:0005840|GO:0006412
Lele48g0878 174 Hamap 30S ribosomal protein S8 [rpsH]. 46 174 IPR000630 GO:0003735|GO:0005840|GO:0006412
Lele48g0878 174 PANTHER 40S RIBOSOMAL PROTEIN S15A 45 173 IPR000630 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele48g0878 Lele-ChrLele48 14115579 14117418 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele48g0878 45 174 Cytoplasmic Ribosomal Protein Gene Family AT5G59850 96.154 1.67e-91 261