Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele48g0871 ATGAATATCATTTCGGTACCCGTGTGCAAGGTTCCAGCTTCAGTGAATTTCGAAAGGGGACTGAGTATGGACCCTTTCTTCCTCCGCCACCACCGTAATAAGGACAAGGTGGTTGTCATCTTGGGAGCCACCGGGTCCGGCAAGTCAAAGCTTGCCATTGACCTGGCCACCCACTTTGCTCCGGTGGAAATCATCAACTCCGACAAAATGCAAGTTTTTCAAGGCCTCGAGATCACCACCAATAAGGTGACAGAGCAGGAATGTCTGGGTGTTCCTCATCATTTACTTGGCATAGCAGATCCCAACCTTGACTTCACCGCCGGCGACTTCATCCACCATGCCTCCTCCGCTGTTGATTCCATCGTCGACAGACATTGCCTTCCCATTGTAGCCGGCGGTTCCAATTCCTACATAGAAGCCTTTGTGAACCACCACGCTGGGTTACAAAATCCCCGGCTTGAGTTTTGCTTCCTCTGGGTCGACGTCTCGCTCCCGGTTCTCCACTCCTTCTTGTCGGACCGGGTCGACCGGATGGTGGAAGCCGGTTTAGTTGAGGAGGTTCGACAAATGTTTAGCCCTTGGGCTGATTATACAAAAGGGATAAGAAAAGCTATTGGAGTTCCAGAGTTGGACCAGTTTCTGAGAACTGAGTCGACGGCCGATGAGAGGACGAAGAAGAAGCTTCTAGAAGTCGCCATTTCTAGGATAAAGATCAACAACTGCCGGCTTGCGAGCCGCCAGCTGCAGAAAATTCATCGGCTTCACGGCTTGTGGAAGCGGAATATGCATCGGCTCGATGCGACGGAGGTGTTCATGATGAGGAATAATTGTGAGGAATCATCGAAGGAGGCGTGGGAGAATCACGTGTTGAAGAAGAGCAGAAGGATCGTTCACAAGTTCTTGTACGAGGAAAGCAATGTTCCGGCGGTCTCTTCTAAAACTCTGAGGAATGTAACACCGTCGATACCACCGCCGGCTTCTCTGGTGGCCATGGCTACTGCAACTCATTAG 1011 0.5114 MNIISVPVCKVPASVNFERGLSMDPFFLRHHRNKDKVVVILGATGSGKSKLAIDLATHFAPVEIINSDKMQVFQGLEITTNKVTEQECLGVPHHLLGIADPNLDFTAGDFIHHASSAVDSIVDRHCLPIVAGGSNSYIEAFVNHHAGLQNPRLEFCFLWVDVSLPVLHSFLSDRVDRMVEAGLVEEVRQMFSPWADYTKGIRKAIGVPELDQFLRTESTADERTKKKLLEVAISRIKINNCRLASRQLQKIHRLHGLWKRNMHRLDATEVFMMRNNCEESSKEAWENHVLKKSRRIVHKFLYEESNVPAVSSKTLRNVTPSIPPPASLVAMATATH 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele48g0871 336 ProSitePatterns Tyrosinase and hemocyanins CuB-binding region signature. 24 35 IPR002227 GO:0016491
Lele48g0871 336 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 164 262 - -
Lele48g0871 336 Pfam IPP transferase 71 144 - -
Lele48g0871 336 Pfam IPP transferase 151 249 - -
Lele48g0871 336 FunFam Adenylate isopentenyltransferase 5, chloroplastic 164 262 - -
Lele48g0871 336 Gene3D - 34 301 IPR027417 -
Lele48g0871 336 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 34 195 IPR027417 -
Lele48g0871 336 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 34 301 IPR039657 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele48g0871 Lele-ChrLele48 14039818 14040828 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele48g0871 152 305 C2H2 Transcription Factor Family AT2G27760 32.597 8.04e-23 97.1