Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele48g0858 ATGGCTTTTGATGATAAGCTATATGCAATCTTCTTCTTGCTTGCCTTGCTTTCACTTTCTGTTACTGCTCAGACTTCCAAAAACATCTCCCTTGGCTCTTCCCTCATTGCCGAAGAAGATGGCTCATTCTGGGCTTCACCATTTAATGAATTTGCATTTGGGTTCAAACAAATTGAGGAAGATGGGTTCTTACTAGCCATCTGGTTCAACAAGATACCAGAAACAACTGTTGTTTGGTCAGCCAATGGACAAAATCTTGCACCAAAGGGTTCTAAAGTTGAGCTCACTTCAAATGGTTGGTTCCATCTGCTTGATCCCAACGGTAAGCAAATCTGGAATGCTAACCCTTTAGGAAACAATGAAGTTGCTTATGCAATCATGCATGATTCTGGTAACTTTCAGTTAGTTGGTTATGACTCTCAAACTTTGTGGCAGAGCTTTGATAAACCCACTGACACAATTTTACCAGAACAAGTTTTAAATCAACCTGCTAAACTAGTTTCATGCTATTTGCCAAATAATTATTCAAAGGGTAGATTTCAGTTTAAACTACAGAATGATGGAAATCTTGTTCTTTACACAAGCCATTTTCCACTAGATGATGTGAATTCTGCTTATTGGAGTACTCAAGTTCTTGGCTTTGGCTTCTCTATGGTCTTCAACCAATCGGGCTACATATTTGTTCAAAGAAGTAATGAAAGTATAATCAAAGAAATATCATCACCAAATGCTACTCAATCTACACGAGATTTCTATCAGAGAGCTGTTCTTGATTATGATGGAGTCTTCAGGCACTATATCTACCCCAAGAATAGTAGCTCTAGTACTGGAACCTGGTCAACTTTGTCTGTAACACCTGAAAATATTTGTTTGCGTGTTAATGGAGATTCAGGAAGTGGAGCTTGTGGTTTGAACAGCTATTGCAGATTTGAAGGGACAACCAAAAGCTGCCATTGTCCCTATGGTTACAGTTTCATTGATCCAAGGGATGTGATGAAAGGTTGCAAACAGGACTTTGTTTCACAAAGTTGTGATCAGAATTCTTTAGAAACTGATCTGTTTGATTTCAATGAGATGCCTAACACGGATTGGCCAGTTTCTGACTATGAACGCTTTCGATCGGTGTCTGAGGATTGGTGCAGAAAAGCTTGCTTGGAAGATTGCTTTTGTGCCCTTGTTATCTTCAAACATAGGGAGTGTTGGAAGAAGAAGCTACCTTTCTCTAATGGAAGAATGGATCGTTCTATTGCAGGCAAAGCTTTGATCAAAATAAGAATGGATGATAGTCCTGACAATAATGATCAATCCACATTGTTTATAATAGATTCCACACTTTTAAGCAGTTCAGTTTTCTTGAACTTGTTGTTAATAGCAGCTTGTTTGGTTGCATATCGATTTGGCCAGAGAAATTCCGAAGTTCATAAAGATGTCAAATTCATATCCAGTATGAATCTCAGAAGTTTCACTTATAAAGAGTTAAAGGAAACAACAAAGGGGTTCACAGAAGAACTTGGTAGTGGTGCATTTTCTACTGTTTACAAAGGTTTTCTACCAGACATACCAGGGAACTTCATTGCTGTGAAAAGATTGAATATGGTGAATGGAAGTGAGAAGGAATTCGAAGTAGAAGTAAGCGCAATTGGTCGAACACATCATAGGCATCTGGTGCAACTGTTGGGATTCTGCAATGAAGGAGAAAACAGGCTACTTGTGTATGAATTCATGAGTAAGGGAACTTTAGCAAGTTTCATTTTCAAAGATCAAAGGCCAACATGGAATATAAGAGTAGAAATTGCAATAGGAATAGCCAAAGGACTCTTGTATTTACATGAAGAGTGCAACACTCAGATCATACACTGTGATATCAAGCCTCAAAATGTCTTGCTTGATGATTCTTACGCAGCTAAAATTTCAGATTTCGGTATAGCAAAGCTGTTGAAGATTGATCAGACTGCAACTACAACAGCAATAAGAGGAACTAAAGGGTATGTTGCAGCTGAGTGGTTCAGAAACAAGCCAATTACCATGAAGGTGGATGTTTACAGTTTTGGAGTTTTGTTATTAGAGCTCATCTGTTGCAGAAAGAACTTTGATATGAATGTTGAAGATGAGAATAAGATGGTACTAATAGATTGGGTATATGATTGCTTTCATTATAGGAGATTGGATTTATTAGTGGAAGATGATAAAGAAGCTCAAATTAACATGAAGAGAGTAGAAGATTATGTGAAGATTGGTATATGGTGTATTCAAGAGGATCCATCAGCAAGACCCACCATGAAGAAAGTTGTTCAAATGCTTGAAGGATTCATGGACGTGTCAAATCCTCCAGAGCTACCATCCTTTACAAGTCAATAG 2358 0.38 MAFDDKLYAIFFLLALLSLSVTAQTSKNISLGSSLIAEEDGSFWASPFNEFAFGFKQIEEDGFLLAIWFNKIPETTVVWSANGQNLAPKGSKVELTSNGWFHLLDPNGKQIWNANPLGNNEVAYAIMHDSGNFQLVGYDSQTLWQSFDKPTDTILPEQVLNQPAKLVSCYLPNNYSKGRFQFKLQNDGNLVLYTSHFPLDDVNSAYWSTQVLGFGFSMVFNQSGYIFVQRSNESIIKEISSPNATQSTRDFYQRAVLDYDGVFRHYIYPKNSSSSTGTWSTLSVTPENICLRVNGDSGSGACGLNSYCRFEGTTKSCHCPYGYSFIDPRDVMKGCKQDFVSQSCDQNSLETDLFDFNEMPNTDWPVSDYERFRSVSEDWCRKACLEDCFCALVIFKHRECWKKKLPFSNGRMDRSIAGKALIKIRMDDSPDNNDQSTLFIIDSTLLSSSVFLNLLLIAACLVAYRFGQRNSEVHKDVKFISSMNLRSFTYKELKETTKGFTEELGSGAFSTVYKGFLPDIPGNFIAVKRLNMVNGSEKEFEVEVSAIGRTHHRHLVQLLGFCNEGENRLLVYEFMSKGTLASFIFKDQRPTWNIRVEIAIGIAKGLLYLHEECNTQIIHCDIKPQNVLLDDSYAAKISDFGIAKLLKIDQTATTTAIRGTKGYVAAEWFRNKPITMKVDVYSFGVLLLELICCRKNFDMNVEDENKMVLIDWVYDCFHYRRLDLLVEDDKEAQINMKRVEDYVKIGIWCIQEDPSARPTMKKVVQMLEGFMDVSNPPELPSFTSQ 785
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele48g0858 785 SUPERFAMILY Protein kinase-like (PK-like) 477 768 IPR011009 -
Lele48g0858 785 Gene3D - 21 149 IPR036426 -
Lele48g0858 785 Gene3D Phosphorylase Kinase; domain 1 462 574 - -
Lele48g0858 785 SUPERFAMILY alpha-D-mannose-specific plant lectins 63 209 IPR036426 -
Lele48g0858 785 ProSitePatterns Protein kinases ATP-binding region signature. 504 528 IPR017441 GO:0005524
Lele48g0858 785 Gene3D Transferase(Phosphotransferase) domain 1 575 778 - -
Lele48g0858 785 ProSitePatterns Serine/Threonine protein kinases active-site signature. 617 629 IPR008271 GO:0004672|GO:0006468
Lele48g0858 785 ProSiteProfiles Bulb-type lectin domain profile. 20 148 IPR001480 -
Lele48g0858 785 Gene3D - 151 284 IPR036426 -
Lele48g0858 785 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 575 775 - -
Lele48g0858 785 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase LECRK1 23 148 - -
Lele48g0858 785 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 35 779 - -
Lele48g0858 785 SMART blect_4 27 150 IPR001480 -
Lele48g0858 785 Pfam D-mannose binding lectin 76 160 IPR001480 -
Lele48g0858 785 CDD B_lectin 40 150 IPR001480 -
Lele48g0858 785 Pfam Protein kinase domain 502 765 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele48g0858 785 FunFam S-receptor-like serine/threonine-protein kinase 467 574 - -
Lele48g0858 785 SMART serkin_6 498 771 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele48g0858 785 ProSiteProfiles Protein kinase domain profile. 498 771 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele48g0858 785 CDD STKc_IRAK 504 770 - -
Lele48g0858 785 SUPERFAMILY alpha-D-mannose-specific plant lectins 173 280 IPR036426 -
Lele48g0858 785 PIRSF SRK 3 785 IPR024171 GO:0004674
Lele48g0858 785 CDD PAN_AP_plant 340 424 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele48g0858 Lele-ChrLele48 13896087 13898444 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele48g0858 468 769 Receptor kinase-like Gene Family AT1G60800 39.683 3.42e-68 234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Lele48g0858 Pkinase 1.4e-46 CL0016