Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele48g0846 ATGGCGATGGTAGACAGCTTTGTCATTCTCTTTCTTCTCCTTATGCTTCTTCTGATCATCGTCCTCATCATTTTTGCCTGCAAACCATGGCGTTTCTTTTTCTTTTCGCGACCCCGTTTAGCCATCAAGGATGATGACATAGAGAGGCCCCTAGTTGTAGATGATGCAAACGAATTACGTAATCAGAGCAATGAATTGCCCCGCGACTATGATCTTGAGGGTGCATGCTTGTTCAATGAGGGTCCTTTTCGCTCACCACGATCACATGGACTTGTTCATAAGCAAAGGCTTCCCGCTTCTTCTCCAAATGTGCCACAAGGTGATAGTTTGGTTTTAGATTTAACTTCTGATGCTCCAGAAGAAGTTTCCTTTGGTCAAACACTTAAGCTTCCCCCAGCCCAGGTAGCTGAAATTCAAAAGCATGCTAGAGTGAATGTTGAAGAGGATAGATTGCAGGACACTGTGCAAAGAGATATCTTAGATCAAAGAAGCTGTCTCACTCTGGAGGTTATCAGTGGTCCTTCTTGTGGAGTCCGTTGTTCTTTACAATCAACAAATCCTTCCCATCTACCTCTGACAATTGGAAGAGTTTCTCCAAGTGATTTATTAATAAAGGATTCAGAAGTGTCAGGAAAGCATGCTCTAATAAATTGGAATTTAGATCAATTGAAATGGGAGTTGGTAGATATGGGTAGCCTGAATGGAACACTTTTGAATTCTCGGTCAATCAACCATCCAGACACTAGCAACAGGCTTTGGGGTGAGCCATTTGAGCTTGCCAATGGAGATATTATAACTCTTGGAACAACATCAAAAGTTGTTGTGCGTCTTTCTTCTCCAAGTAGGCATCAAATTCCATTTGGAGTAGGTATGGTTTCAGATCCCATGGCTTTACGTCAAGGAGGAAAAAAGCTACCTATGGAAGACGTTTGCTATTATCAATGGCCTCTTCCTGGGCTGGATCAGTTTGGACTATTTGGCATCTGTGATGGGCATGGTGGAGATGGGGCTGCTAAATCTGCTAGCAAGCTTTTTCCCGAAATAGTTTCTAGCATATTATCAGATTCATTAAAAAGGGAGAGGGTTTTATCACTTCATGATGCATCTGATGTTCTTAGAGAGGCATTTTCTCGAACAGAAGCAAGCATGAATCACCATTATGAGGTCCAGGTCCATGCATTCAAGGATTCCATGGGGAAGAGCATGGGAATTAAGGGATGTACAGCAACATCGCTTCTGGTGTGGGTTGATGGTGATGAAAATTTTTATGCACAATGTGCAAATGTTGGGGACTCTTCCTGTGTTATGAGTGTCAATGGGAAACAGATCAACATGACAAAAGATCACAAGATAGCAAATGCTTCTGAAAGACTCCGAATTGAAGAGAGGGGTGAGCCATTGAAAGATGGGGAAATGCGTCTATACGGTATAAATCTTGCAAGGATGCTTGGGGACAAATTTCTCAAAGAAAAAGATTCCCGGTTTAGTTCAGAGCCTTACATAAGTCAAGCAGTTCACATTGATCAAACAAGCCGGGCTTTTGCCATTATAGCTAGTGATGGTTTGTGGGATGTCATCAGCATGAAGAAGGCTATTCAGCTGGTGCTTCAGGCGAGAGACAGATACTCCTCAGTCGCAGAGAATTCTGCAGAAAAGGTTGCTAATTTCTTGGTGGGTGAGGCTAGAACACTCAGAACAAAGGATAATACCTCTGTAATTTTCTTAGATTTTGATAACTTCGCCAGTTCCTCTTGTAAATCTGAGTCCTAG 1770 0.4243 MAMVDSFVILFLLLMLLLIIVLIIFACKPWRFFFFSRPRLAIKDDDIERPLVVDDANELRNQSNELPRDYDLEGACLFNEGPFRSPRSHGLVHKQRLPASSPNVPQGDSLVLDLTSDAPEEVSFGQTLKLPPAQVAEIQKHARVNVEEDRLQDTVQRDILDQRSCLTLEVISGPSCGVRCSLQSTNPSHLPLTIGRVSPSDLLIKDSEVSGKHALINWNLDQLKWELVDMGSLNGTLLNSRSINHPDTSNRLWGEPFELANGDIITLGTTSKVVVRLSSPSRHQIPFGVGMVSDPMALRQGGKKLPMEDVCYYQWPLPGLDQFGLFGICDGHGGDGAAKSASKLFPEIVSSILSDSLKRERVLSLHDASDVLREAFSRTEASMNHHYEVQVHAFKDSMGKSMGIKGCTATSLLVWVDGDENFYAQCANVGDSSCVMSVNGKQINMTKDHKIANASERLRIEERGEPLKDGEMRLYGINLARMLGDKFLKEKDSRFSSEPYISQAVHIDQTSRAFAIIASDGLWDVISMKKAIQLVLQARDRYSSVAENSAEKVANFLVGEARTLRTKDNTSVIFLDFDNFASSSCKSES 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele48g0846 589 SUPERFAMILY PP2C-like 299 579 IPR036457 -
Lele48g0846 589 Gene3D - 295 583 IPR036457 -
Lele48g0846 589 ProSiteProfiles PPM-type phosphatase domain profile. 288 577 IPR001932 -
Lele48g0846 589 FunFam Protein phosphatase 2C 70 161 295 - -
Lele48g0846 589 Pfam FHA domain 193 268 IPR000253 GO:0005515
Lele48g0846 589 Gene3D - 161 294 - -
Lele48g0846 589 FunFam Protein phosphatase 2C 70 296 584 - -
Lele48g0846 589 SUPERFAMILY SMAD/FHA domain 164 276 IPR008984 GO:0005515
Lele48g0846 589 CDD FHA 166 279 IPR000253 GO:0005515
Lele48g0846 589 CDD PP2Cc 300 577 IPR001932 -
Lele48g0846 589 Pfam Protein phosphatase 2C 300 570 IPR001932 -
Lele48g0846 589 ProSitePatterns PPM-type phosphatase domain signature. 325 333 IPR000222 GO:0043169
Lele48g0846 589 ProSiteProfiles Forkhead-associated (FHA) domain profile. 192 243 IPR000253 GO:0005515
Lele48g0846 589 PANTHER PROTEIN PHOSPHATASE 2C 284 574 IPR015655 GO:0004722|GO:0006470
Lele48g0846 589 SMART FHA_2 191 243 IPR000253 GO:0005515
Lele48g0846 589 SMART PP2C_4 283 575 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele48g0846 Lele-ChrLele48 13783194 13800612 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele48g0846 1 578 PP2C-type Phosphatase Gene Family AT5G19280 55.281 0.0 642