Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele48g0827 ATGGCGAGTCGACTGAAGGAAGATGAGAAAAATGAGCGAATAATTCGAGGTCTTCTCAAACTTCCAGCGAATCGAAGATGTATTAATTGCGACAGTCTGGGGCCACAATATGTGTGCACAAATTTCTCGACATTTGTTTGCACAAACTGTAGTGGGATACACCGGGAATTTACTCATCGAGTAAAGTCAGTATCAATGGCCAAGTTCACCTCACAAGAAGTTAGTGCACTTCAGGAAGGAGGAAATCAGTGTGCAAAAGAAGTTTATTTTAAAGAGTGGGACCAGAGAAGTCATTCTCTCCCTGAAAACAGTAATGTTGGCAGGCTCCGCAGCTTTATTAAACAAGTTTATGTGGATAAAAGATTCATCAGTGAGAGGACCTATGACAAATCACTGAGAGTAAACACAGGTGACAAGGAGCATTTCTCAGAAAACTCAAGAGTTCAATCATATCAGGGTGGTCCTAAAAGCCCACAATATGATGACACATATAAACACCGATATAGTGACAGCTCTAGCCCTGTTGGAAGAAGTCCTGGGTATGATCAAGAAAGTAGGCAGTACAGTAATGAGAAGAGAAGTCCTGGCCATCCTCCGATTATCAATGATTGGCGTCGAGAAGATAGATTTGGAGATGATAGGAGGTTTGAAGGTCGTAGAGTATCTGATGGAGATTATAAGCTGGAAGGCCAATTTCCTGGGCAAGCCAGCAACCTGAATTCTTCAAGTCCACCTGTGGTTCGGTCTGTTAGAGATATTTTGGGAGAAAATGTGGCGCCTCTTCAAATAAGTGAGCCCCCTGAAGCAAATAGTAAAAAAGCTAATGATGGCTCAGCTCTCACACAGAGAACTGTATCTTCCAGTAGCTTGGCATCAAGCATTGGAAACCCTGCAGAAGTTAAGCTTAAGACTTCTAAGAGCCTTATTGATTTTGATGATGAGCCCGAGCCTCCTCTAGCTCCAGCAATTACTCACGCCCAACAAACTACTGCCCAATCCATTTTGGAGCAACTAAATTCCAGTGATGTCAACAATTGGGCCTCTTTTGATGTGGCCCTAGAAGCAAAAGCAATTAAAACTCCTTCAAATATAAATACACTAGAATCCATGCTTTCCCAACTGTCAGTATCATCATCATTACCAGCTCATGCTCCTCAAGTCCGACATGGTTCCAATGTCGTAACCCCATTTCCTGGGAGCAGTATGACATTACTAAGGACTGGGAACTTATCTGTTTCACCTGCTTGGCCTGCACCAGCACCATCTCTTACTGCAACTGCTGTTGGAGCTGCAACTATTAGCAGCTTTGCAAATTTTCCATACGGTGTCGCTTCAGCATCGCAGCATGTGCAGCCTTTGTTCCCTCCCAATGTTGGTCAGTCTTCGAATCATCAGTCTACATCACCACCAGTAGGAGCATTGAGTAATCAGCCATGGAGTATACCTCCAGCACCAACAACACAAGGCCATCCAAGCATGTCATTGCCACATGTCTCCCATCTTATCTCTAAGCCTGCCACTGAGACTAACTCCAGTGCGGCTTCAGGACTGTCTGTAGAAGTAAAACCAAGTGAAAGAAAAGAACTTCCTGCGGATCTTTTTACTGTAAATTATTGTTCCTTCCCTACTGTAGTTCCAGGGTGGCAAATGGTTCCTCCTTATGGCATGGGAATCTCAATGCCATATAATACTGTGGTAATGCTATTTCAATCCGACTACATTACCACACAATTTGCTTTGAGACCATCCTTGCAAGGTGCTCTGCCAAGTATATCAACTTCAGGTTCAATGCTTCCTTCAGGCCTAAGTAATCCATCAATTGCCTGGAATCCGCCTGGGTACAGATTAGCGCTGCCCCCACAAACACAACCTCATCCACCAGCAATGGCAGCAAGGCCTTACATGGGGCAACAAGTGCGAATTAACGTGGTAATGCCAAGGCATCAGGGAATTGGGAGCTCTGGGGCTGAGGGAGCTGCTTTTGGCTTCTCAAACATAGATCAGCATATGACTGCTACTTCCTCAGCCCCTGTTTCCTCAAATCTCTCATCTGCAGCAAGGAATCCATTCGGATGA 2076 0.4465 MASRLKEDEKNERIIRGLLKLPANRRCINCDSLGPQYVCTNFSTFVCTNCSGIHREFTHRVKSVSMAKFTSQEVSALQEGGNQCAKEVYFKEWDQRSHSLPENSNVGRLRSFIKQVYVDKRFISERTYDKSLRVNTGDKEHFSENSRVQSYQGGPKSPQYDDTYKHRYSDSSSPVGRSPGYDQESRQYSNEKRSPGHPPIINDWRREDRFGDDRRFEGRRVSDGDYKLEGQFPGQASNLNSSSPPVVRSVRDILGENVAPLQISEPPEANSKKANDGSALTQRTVSSSSLASSIGNPAEVKLKTSKSLIDFDDEPEPPLAPAITHAQQTTAQSILEQLNSSDVNNWASFDVALEAKAIKTPSNINTLESMLSQLSVSSSLPAHAPQVRHGSNVVTPFPGSSMTLLRTGNLSVSPAWPAPAPSLTATAVGAATISSFANFPYGVASASQHVQPLFPPNVGQSSNHQSTSPPVGALSNQPWSIPPAPTTQGHPSMSLPHVSHLISKPATETNSSAASGLSVEVKPSERKELPADLFTVNYCSFPTVVPGWQMVPPYGMGISMPYNTVVMLFQSDYITTQFALRPSLQGALPSISTSGSMLPSGLSNPSIAWNPPGYRLALPPQTQPHPPAMAARPYMGQQVRINVVMPRHQGIGSSGAEGAAFGFSNIDQHMTATSSAPVSSNLSSAARNPFG 691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele48g0827 691 Gene3D Arf GTPase activating protein 2 135 IPR038508 -
Lele48g0827 691 SMART arf_gap_3 12 130 IPR001164 GO:0005096
Lele48g0827 691 PRINTS HIV Rev interacting protein signature 43 60 IPR001164 GO:0005096
Lele48g0827 691 PRINTS HIV Rev interacting protein signature 61 82 IPR001164 GO:0005096
Lele48g0827 691 PRINTS HIV Rev interacting protein signature 24 43 IPR001164 GO:0005096
Lele48g0827 691 MobiDBLite consensus disorder prediction 139 246 - -
Lele48g0827 691 FunFam Arf-GAP domain and FG repeat-containing protein 1 1 135 - -
Lele48g0827 691 CDD ArfGap_AGFG 12 124 - -
Lele48g0827 691 MobiDBLite consensus disorder prediction 454 497 - -
Lele48g0827 691 MobiDBLite consensus disorder prediction 198 226 - -
Lele48g0827 691 MobiDBLite consensus disorder prediction 454 494 - -
Lele48g0827 691 Pfam Putative GTPase activating protein for Arf 13 125 IPR001164 GO:0005096
Lele48g0827 691 PANTHER ARFGAP/RECO-RELATED 1 691 IPR044820 GO:0005096
Lele48g0827 691 SUPERFAMILY ArfGap/RecO-like zinc finger 11 124 IPR037278 -
Lele48g0827 691 MobiDBLite consensus disorder prediction 259 293 - -
Lele48g0827 691 MobiDBLite consensus disorder prediction 169 185 - -
Lele48g0827 691 MobiDBLite consensus disorder prediction 268 293 - -
Lele48g0827 691 ProSiteProfiles ARF GTPase-activating proteins domain profile. 12 130 IPR001164 GO:0005096
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele48g0827 Lele-ChrLele48 13600893 13607444 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele48g0827 12 137 C2H2 Transcription Factor Family AT4G05330 33.588 1.58e-12 67.4