Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele48g0825 ATGAAGAAGAAGGTATATTTCCCTCTTCTCATTGCCTTCTTCTTAGGCGCAGTCTCCCTCTCTGCCGCCGCCGATGTCCCCATTACCAGCCATGGAGCTCTCACTGACGCCGAGGTCATGTACGTCAGGCAACGTCAGCTTCTTTACTACAGAGACGAGTTCGGCGACAGAGGAGAACAAGTCACCGTCGATCCTTCTCTGATTTTCGAGAACAATCGCATTAGAAATGCTTATGTAGCTTTACAAGCATGGAAGCAAGCCATTCTTTCCGATCCTAACAATTGTACGCTCAATTGGGTTGGAGCCAATGTCTGTAACTATAGTAATGTTTTCTGTGCTCAGGCGCTTGACAACCCTAAGATTCGTACTGTTGCCGGCATTGATCTCAACCACTGTGACATTGCTGGGTACTTGCCGGAGGAGCTTGGACTACTCTCGGATCTTTCTCTCCTCCACATCAACACTAACAGGTTCTGTGGTACTGTTCCTCACAAGTTTGATAGGCTGAAACTTCTGTTTGAACTGGATCTCAGTAACAATAGGTTCGCCGGGAAGTTCCCCACGGTGGTTCTGAGGCTTCCAACTCTCAAGTTCTTGGATCTGAGATTCAATGAATTCGAGGGGACGGTGCCTAGAGAGCTTTTTGACAAGGATCTGGACGCGATCTTCATAAACAACAATCGTTTTGTGTTCGATCTTCCTGACAATTTTGGGAACTCTCCGGTGTCAGTCATCGTTGTCGCCAACAACAAGTTCCATGGTTGTCTCCCGGCGAGCTTGGGCAACATGACGAACCTGAACGAGATCATCCTGTTGAATAATGCTCTCCGTTCGTGCTTGCCTTCCGAGATTGGGTTGCTGAAGAACTTGACAGTGTTCGATGTGAGCTTCAATCAGCTCTTGGGTCCCTTGCCAGACACCATTGGAGGCATGGTGAGCCTTGAGCAGTTGAATGTAGCTCACAATTTGCTTTCTGGGAAGATTCCAGGGAGCATTTGTATGCTGCCAAACCTACAGAACTTCACATATTCATATAACTTCTTCACTGGAGAGCCACCGTCGTGCCTCAGCTTGCCGTCGTTCGATGATCGGAGAAACTGCTTGCCGGCAAGGCCACTACAGAGGTCGGCGACACAATGCAAGGCTTTCTTGTCACGGCCTGTGGACTGTAACTCGTTTAAATGTAAGCCATTTGTTCCGTCGCTTCCTCCACCTCCTAACCCTTCCCCTCCGATTCCGGTGCCTTCCCCACCACCCGTGGTCGTACCTTCACCTCCTCCATCACCGGTTTACGTTCCACACTCTCCGCCTCCACCTTCTCCGCCGCCACCTACGCCGCCACCTCCGGCGTATTCGCCCCCACCACCTCCGCCGGTTTATTCACCACCACCACCTCCACCAGTCTACTCTCCACCTCCTCCTCCACCTTCTCCACCCCCACCGTCACCTCCTCCGCCAGTCTACTCTCCACCCCCGCCACCACCACCGCCTCCCCCTCCTTCACCACCCCCACCTTCACCTCCCCCGCCAGTCTATTCACCACCACCACCGTCACCTCCACCTCCTTCTCCATCGCCACCTCCACCTCCACCCTCTCCTCCCCCTCCATCTCCTCCATCCCCATCACCCACACCATATTGCGTCCGCTCTCCACCGCCACCGCCACCGCCACCGACTTACAGCTCGCCTCCACCGCCTCCTCACTCCCCTCCACCGCCTCCTCACTTTCCTCCAACTCCTCCTCACTCCCCTCCGCCGCCTATTTATCCCTATTTATCACCACCACCTCCTCCCCCTGTCCATTCACCACCCCCACCATCTCCCCCACCTTGTATAGAACCACCCCCACCCCCACCACCTTGTGAAGAGCATCCACCACCGTCACCTTCTCCCACACCTTATTTACCACCTCCATCCCCATCTCCCCCTCCACCACCATCTCCTGTTCAGTACAGTTCGCCGCCGCCGCCTGTTCAGTACAGTTCCCCGCCACCGCCAGCAGTTCATTACAGTTCTCCCCCACCACCAGTATACCATTCTCCTCCACCACCATCGCCACCTCCCTGTGAAGAAACTCCGCCTTCTGCATCCCCACCTCCACCGGTCACATACGGAAACCCACCTGCTCCTGTATATGAAGGGCCTTTGCCACCTGTCTTCGGAGTCTCTTACGCATCTCCACCTCCACCACCCTTCTATTGA 2202 0.5445 MKKKVYFPLLIAFFLGAVSLSAAADVPITSHGALTDAEVMYVRQRQLLYYRDEFGDRGEQVTVDPSLIFENNRIRNAYVALQAWKQAILSDPNNCTLNWVGANVCNYSNVFCAQALDNPKIRTVAGIDLNHCDIAGYLPEELGLLSDLSLLHINTNRFCGTVPHKFDRLKLLFELDLSNNRFAGKFPTVVLRLPTLKFLDLRFNEFEGTVPRELFDKDLDAIFINNNRFVFDLPDNFGNSPVSVIVVANNKFHGCLPASLGNMTNLNEIILLNNALRSCLPSEIGLLKNLTVFDVSFNQLLGPLPDTIGGMVSLEQLNVAHNLLSGKIPGSICMLPNLQNFTYSYNFFTGEPPSCLSLPSFDDRRNCLPARPLQRSATQCKAFLSRPVDCNSFKCKPFVPSLPPPPNPSPPIPVPSPPPVVVPSPPPSPVYVPHSPPPPSPPPPTPPPPAYSPPPPPPVYSPPPPPPVYSPPPPPPSPPPPSPPPPVYSPPPPPPPPPPPSPPPPSPPPPVYSPPPPSPPPPSPSPPPPPPSPPPPSPPSPSPTPYCVRSPPPPPPPPTYSSPPPPPHSPPPPPHFPPTPPHSPPPPIYPYLSPPPPPPVHSPPPPSPPPCIEPPPPPPPCEEHPPPSPSPTPYLPPPSPSPPPPPSPVQYSSPPPPVQYSSPPPPAVHYSSPPPPVYHSPPPPSPPPCEETPPSASPPPPVTYGNPPAPVYEGPLPPVFGVSYASPPPPPFY 733
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele48g0825 733 Gene3D Ribonuclease Inhibitor 242 377 IPR032675 -
Lele48g0825 733 MobiDBLite consensus disorder prediction 428 720 - -
Lele48g0825 733 FunFam Leucine-rich repeat extensin-like protein 1 78 239 - -
Lele48g0825 733 SUPERFAMILY L domain-like 78 361 - -
Lele48g0825 733 FunFam Leucine-rich repeat extensin-like protein 5 240 379 - -
Lele48g0825 733 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 26 521 - -
Lele48g0825 733 Gene3D Ribonuclease Inhibitor 78 241 IPR032675 -
Lele48g0825 733 PRINTS Proline rich extensin signature 403 419 - -
Lele48g0825 733 PRINTS Proline rich extensin signature 426 438 - -
Lele48g0825 733 PRINTS Proline rich extensin signature 446 467 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele48g0825 Lele-ChrLele48 13580438 13582639 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele48g0825 5 395 Trihelix Transcription Factor Family AT4G18670 72.959 0.0 618
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele45g0615 45 5056362 5060376 Lele48g0825 48 13580438 13582639 hybridization
Lele46g0656 46 4755110 4757347 Lele48g0825 48 13580438 13582639 hybridization