Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele48g0797 ATGCGATCCCTCAATATCCTTCTTCCATTGCCGTCGCTGCAAAACCCTACCTCCGACCACATTCATTTCTTCAAACCCATTAGCGCCTTCAATTTCCGCCCAACTTCCAAAACCCTAACTAACGGTTTTTGCTTCAGAGTCCAAGGCGGTGGACTCCACTGCCGGAAGGTTAATTGCAATGCTTTGAGGGATTCCGGTGAAGACACTAAGGTTGTATTGGACTCCAGTGGCGGCGATGATGGCGGAGGGAGTGGTGGTAACGGCGGTGATGGGGGTGAGGATAATAGGGAGGTGCAGAAAAAAGGTGGGTCTTCTTCGGGACCTTTGCCGGATTGGTTGAATTTCACTTCTGATGACGCAAAGACCGTCTTTGCGGCACTGGCAATCTCTCTTGCGTTTCGGTCGTTTGTGGCCGAGCCTAGGTACATTCCTTCCTTGTCAATGTATCCTACCTTTGATGTTGGAGATCGACTTGTTGCAGAGAAGGTTTCATACTATTTTAGAAAGCCTTGCGCAAATGACATAGTAATATTTAAGAGCCCACCAATCCTTCAGGAAGTTGGGTACACCGATGATGATGTCTTTATAAAACGAGTGGTTGCAGAAGAAGGTGATATTGTGGAGGTTCATAAAGGGCATCTTATAGTTAATGGGGTTGAAAGGAATGAAAAGTTCATCCTTGAACCACCTTCTTATGACATGACACCTACGCGTGTGCCAGAGAATTACGTTTTTGTGATGGGAGACAATCGTAACAACAGTTATGATTCGCATGTGTGGGGCCCCCTGCCAGCTAAGAACATCATAGGTAGATCGGTTTTTCGGTATTGGCCACCAAATAGGATTGGCAGTACAGTTCCGGAGAAGGGTTGTCCTGTTGAAAGTGACCAGGGGTCTAGTTTAGCTTCGCAATGA 915 0.4699 MRSLNILLPLPSLQNPTSDHIHFFKPISAFNFRPTSKTLTNGFCFRVQGGGLHCRKVNCNALRDSGEDTKVVLDSSGGDDGGGSGGNGGDGGEDNREVQKKGGSSSGPLPDWLNFTSDDAKTVFAALAISLAFRSFVAEPRYIPSLSMYPTFDVGDRLVAEKVSYYFRKPCANDIVIFKSPPILQEVGYTDDDVFIKRVVAEEGDIVEVHKGHLIVNGVERNEKFILEPPSYDMTPTRVPENYVFVMGDNRNNSYDSHVWGPLPAKNIIGRSVFRYWPPNRIGSTVPEKGCPVESDQGSSLASQ 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele48g0797 304 Pfam Signal peptidase, peptidase S26 120 277 IPR019533 GO:0004252|GO:0006465
Lele48g0797 304 ProSitePatterns Signal peptidases I signature 3. 244 257 IPR019758 GO:0004252|GO:0016020
Lele48g0797 304 PANTHER SIGNAL PEPTIDASE I 108 283 IPR000223 GO:0006508|GO:0008236|GO:0016020
Lele48g0797 304 TIGRFAM sigpep_I_bact: signal peptidase I 121 279 IPR000223 GO:0006508|GO:0008236|GO:0016020
Lele48g0797 304 ProSitePatterns Signal peptidases I serine active site. 145 152 IPR019756 GO:0004252|GO:0016020
Lele48g0797 304 MobiDBLite consensus disorder prediction 70 109 - -
Lele48g0797 304 CDD S26_SPase_I 139 271 IPR019533 GO:0004252|GO:0006465
Lele48g0797 304 Gene3D Umud Fragment, subunit A 133 289 - -
Lele48g0797 304 SUPERFAMILY LexA/Signal peptidase 134 285 IPR036286 -
Lele48g0797 304 PRINTS Bacterial leader peptidase 1 (S26A) family signature 136 152 IPR000223 GO:0006508|GO:0008236|GO:0016020
Lele48g0797 304 PRINTS Bacterial leader peptidase 1 (S26A) family signature 195 207 IPR000223 GO:0006508|GO:0008236|GO:0016020
Lele48g0797 304 PRINTS Bacterial leader peptidase 1 (S26A) family signature 239 258 IPR000223 GO:0006508|GO:0008236|GO:0016020
Lele48g0797 304 MobiDBLite consensus disorder prediction 285 304 - -
Lele48g0797 304 FunFam Peptidase/ serine-type peptidase 145 276 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele48g0797 Lele-ChrLele48 13284589 13287133 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele48g0797 148 278 MADS-box Gene Family AT1G29960 33.083 3.28e-12 60.8