Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele48g0790 ATGTCTTTAAAGAAGTATCCATGGTTGCGCAATGCCAAATCTCCACTCTGGGAGTTACTGACCTTCCTCTTCGCTTTTGAAAAGCTTTTGCTTCTGTGAATATCCCCTCGGGACCCAGTCATGTACAGATCATTCATGACATGTGATAATCCAAAAGGAGTCGTGGAATGCGGGGCAATCAGAAAGTGCAGGGCTGGATCACAGAAGATGAAGGACAAGATGAAGAGTCACAGGAGGACAGCTGAGAAATCTGAAGCATCTTTGTCAAAAAAGTCAGGCAGAGAAGAAATGGTCCCAAAAGGATCATCACAAAGTTCTGTGGATCCATCTTCCTTGCAGCTTATGGAGGTCTCTAGAGGTGCTCAAAGGTTGAACAACATGATTGATACATGGTCTAGGGATATGAGATATAATGGAAGGTCTGGAGAGATTGCAAAAGATTTGTTGAAAGGAGCTCTTGATCTACAAGAATCTCTAGTCGTGCTTCGGAAGTTGCAAGAAGCTTCACGGCACAAGTCCTGTTTGAAGAAAAACCAGAATGAGAAACCTGAAAGAGGAAGAATTGATGCAAAGATGATGGATGGAACATACACTAATAGCCAATTTAGTGAACAAAGTTATCCAATGGGATTTGAAAGACCTCGCCGTTCTGATGGTGGTTCTTCAAGAAATTGCGCAGAGGACCTTAAGAAAGTGATCAAAGACAGTCTGATTAGGCAAAATCTGTTTACGATGCCAAGTTCTGAAGGATTAGATTCTGCATCAGAAATTCCCTCAACAAGCTCAAGCCAATCTTCTGGGGTTCATACTGATAGGCTTTCTGATTCATCTTTTTCATCAGGCACTTCAAAGGTGAGAGGAACCAGTCTAGTTGCCAAGCTAATGGGTTTAGAAGAAGCCCCTTCAAGACTATTTCCAGCTGCTGCGCAGAAACAGTTGCAGGGTGAAAAAATTCTGAATCAAAAGAGACCCACATATGAGATAGATATACCCAAGTTAAAAAGGACCAGTTCTATAATTGAGAAGGTTGATCCAGAACGAAAGAAGACCCTGAGTGAAATTCTTGAGACTATTTATTTCAAAGGACTCTCGAAGAAGAGTTCTGTCTTAGAGCCTAATCTCCGGATTCGTCATTCCAATGATTACCATCCCAAACAATGTGATAATTTACCGCCAATTGTACTCATGAAACCTCGATATAGTTCATACCAGGAATCAGTTAAATCCCACGCACTTGTTCCTCCAGATCCAGAAGGTCTATCCCTTAGAAAACCAAAAGCAGAGGTAGTCCCTTCCAAATCATTCAAACAAAAAGGGTCCACCAGGATGGTGGGCAGAGCAGAAGATGTGACCAAAAGGCTTAGACATGAGGAAAAGCCTAAAATCCTCAAAGAGTTCGTGAAACTGGATGAGAAAGCAATCATGCCGATTGAAACGTCTCCATATATGGTGAAATTATATAGTCATGTAAGTCATAAACCACAGGTACAGGAGGCAATTGAGAAAAAAGCTAAGGTGAAAACTGTTACCAGAAAGCTGCCAGAAAAGGAGATCTCAAAACCTAAAATTTTGACAAGGTCCCAAGATCGAGGAGAAATTACCTCCACAAAGTTGAGGACACCACCTGGTGAATTGACCATAATCAAGAATGAGATTCCCTCGCAGCAGAGCACAGCTTTGATCATCAGCCCAAAAACAACAAAGAATAAGAATTTCAAACTGAGAAAGAATCAGAATAATAGCCAGAAGCTTATTCCAGAGCCTGAAGCAGCTAAACCAGTTGATGAACAATCAGTAGGCGAAGAGAAGAGTATTGTTGCTCCTTGTGAAGATGATTGCACTGAGATTAGAACTATAGTGGAACATGCAGTCGAATTTTCAGTTGAACATGAAGTAGATGCCTCCACGAGCAAGATGGATGAAGGTTGTTATCAGAGCCTGAACTCTTCAAGTAATGATGTTGCACCGCTAAAGGTTGAGCAAGAAATTGATGCTACTTCTGCTGAAGAAGTTCGTGACGGGAACAATGGTGGGGAAACAGATAGCAAGGCTGACAAAGAAGGGGCTGAACTGAAATATTTTCTTTTAACCGACCCATTGTTTGTTGGCCATGCAGAGGAGCTCCTGAATCTTGATGTGGATTGTCCCATGACCCTGCAAAAATATGAAACCAATGGGATGGCCAATCCCAGACTCTATTTGGATTGTGCAAATGAACTCGCTGAGCGTAAAAGCCTGCAAGATTCACAAATGGTTCATCCAATCCTACTAACTCGAGCAGGGAACTCAAGATTACAGATCTCTTTAGGCAGGTTGGTTGAAGAAATCTATAATGCCATTGAGAAGCTGAAGTTTTACACTATGGTCACTGGGGAGAAATTCTCTTTAGATAATATCTATGCAATGATGAAAAGTGATATAAAGTGCCATGGGCTGATAAATGGAATGTGGGACTGGGGTTGGAGGTATGGATTTTCTGCAGATGAATCTGAGCAAGTTGTCAACGAAGTAGAGAGCCTAGTTTTAAGTGGGTTGATTGAAGAGCTTATCGTGGATTTATAG 2562 0.4169 MSLKKYPWLRNAKSPLWELLTFLFAFEKLLLLXISPRDPVMYRSFMTCDNPKGVVECGAIRKCRAGSQKMKDKMKSHRRTAEKSEASLSKKSGREEMVPKGSSQSSVDPSSLQLMEVSRGAQRLNNMIDTWSRDMRYNGRSGEIAKDLLKGALDLQESLVVLRKLQEASRHKSCLKKNQNEKPERGRIDAKMMDGTYTNSQFSEQSYPMGFERPRRSDGGSSRNCAEDLKKVIKDSLIRQNLFTMPSSEGLDSASEIPSTSSSQSSGVHTDRLSDSSFSSGTSKVRGTSLVAKLMGLEEAPSRLFPAAAQKQLQGEKILNQKRPTYEIDIPKLKRTSSIIEKVDPERKKTLSEILETIYFKGLSKKSSVLEPNLRIRHSNDYHPKQCDNLPPIVLMKPRYSSYQESVKSHALVPPDPEGLSLRKPKAEVVPSKSFKQKGSTRMVGRAEDVTKRLRHEEKPKILKEFVKLDEKAIMPIETSPYMVKLYSHVSHKPQVQEAIEKKAKVKTVTRKLPEKEISKPKILTRSQDRGEITSTKLRTPPGELTIIKNEIPSQQSTALIISPKTTKNKNFKLRKNQNNSQKLIPEPEAAKPVDEQSVGEEKSIVAPCEDDCTEIRTIVEHAVEFSVEHEVDASTSKMDEGCYQSLNSSSNDVAPLKVEQEIDATSAEEVRDGNNGGETDSKADKEGAELKYFLLTDPLFVGHAEELLNLDVDCPMTLQKYETNGMANPRLYLDCANELAERKSLQDSQMVHPILLTRAGNSRLQISLGRLVEEIYNAIEKLKFYTMVTGEKFSLDNIYAMMKSDIKCHGLINGMWDWGWRYGFSADESEQVVNEVESLVLSGLIEELIVDL 853
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele48g0790 853 MobiDBLite consensus disorder prediction 98 114 - -
Lele48g0790 853 MobiDBLite consensus disorder prediction 68 114 - -
Lele48g0790 853 MobiDBLite consensus disorder prediction 639 684 - -
Lele48g0790 853 MobiDBLite consensus disorder prediction 68 97 - -
Lele48g0790 853 MobiDBLite consensus disorder prediction 200 226 - -
Lele48g0790 853 MobiDBLite consensus disorder prediction 244 280 - -
Lele48g0790 853 MobiDBLite consensus disorder prediction 639 656 - -
Lele48g0790 853 PANTHER OS01G0228800 PROTEIN-RELATED 38 853 - -
Lele48g0790 853 MobiDBLite consensus disorder prediction 663 684 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele48g0790 Lele-ChrLele48 13242063 13246999 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele48g0790 691 850 TRM (TON1 Recruiting Motif) Superfamily AT3G24630 30.357 2.31e-17 85.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele45g0645 45 5379464 5382289 Lele48g0790 48 13242063 13246999 hybridization
Lele46g0690 46 5111882 5115968 Lele48g0790 48 13242063 13246999 hybridization