Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele48g0787 ATGGGGGAAGGTGAGGGGGGAGATTACCCTCCGAAGAATGTGTCATCGGATGCTACAGGAGCAGCGTTGCCGTCGGATGTTCCGGCAAAGAAGCTTGCGAGGCAGCTCGATTTCACGGGTTATAGTGGTGCGGCCTTGCCTGAACACCCCGAGCCGCAGTCGCAGGCGGTGGTGCAGAGCCAGCCGCAGCCACGCCCAGTTACAATGCAACCGGTTATTTTGATGCCTATGCCACCGCAGGCGCCTCATTCTTCAGCAAGCTTTGGGAAACCAGAATCTCCAAAATCAAGATCAAAACCCAACTTTGATATGAAGGATGTTACTCCTAAGAAACAAAAACAGTGTAATTGTAAACACTCGAAATGTCTAAAGTTATATTGTGAATGTTTTGCATCGGGAATATATTGTGATGGGTGCAACTGTGCAAACTGCTATAACAATGTTGAAAATGAAGCTGCTAGACGAGAAGCTGTTGAAGCCACTTTGGAGCGCAATCCAAATGCATTTAGGCCAAAAATTGCAAGCAGCCCTCATGGAACACGCGATAGCAGGGAGGATGCTGGTGAAATTTTAATACTAGGAAAGCACAACAAGGGGTGCCATTGCAAAAAATCTGGATGCCTCAAGAAGTACTGTGAGTGCTTCCAAGCCAACATTCTTTGCTCTGAAAATTGTAAATGCATGGACTGCAAAAATTTTGAGGGAAGTGAAGAAAGACAAGCTTTGTTCCATGGAGATCAGAATAATAACATGGCATATATCCAGCAGGCAGCAAATGCTGCCATAACCGGAGCAATTGGGTCTTCTGGTTATGCATCCCCTCCAGTGTCCAAGAAAAGAAGAGGCCAGGAACTCTTCTTTGGGCCAACAACAAAGGATACGTCCGTAGGCAGGCTTGGCCAATTTCAACAGGCAAACCATATCAAAAGTCCTGCACCCTCCTCATCCTTGTGTCCTGTCCCTTGTGCCCGTGTTGGAACTGCAGCATTAGGGCCTTCTAAATTTACATACAGATCCCTTTTAGCAGACATCATACAACCACAGCACTTGAAGGAGCTTTGCTCCGTCCTGGTGCTAGTATCAGGACAAGCTGCAAAGACTCTTACAGACCAGAAAATGTTGATGGAAAAGAATGCAGAAGATCAGGTGGAAACTTCCGTAGCTTCTTCAACTCAAGAGCAATTGCCAAGTCGAAAGGAAGTTGATGTTGAGAAAGCTATGGCTGATGATTGTTCAAGTGCAAACCAAACAGATAAAATCAGCCCAGATAATTCTAGTTCAGATGGGGCTGATGCCCCAAAAAGCAGGCCAATGTCTCCTGGAACCTTAGCCTTGATGTGTGATGAGCAAGATACATTGTTCATGACAGCTCCATCCCCTAATGGTTCATTGGATCACGCTTGCAATACGTCTTTACGTTCTCTGTATGGACAAGGCATGACAGAGGTTTATGCAGAGCAAGAAAGGATTGTTTTGACGAAGTTTAGAGATTTTCTTAATCGGGTTATCACAATGGGAGAATTAAATGAAACAAAGTGTTCTTCATTAACCAGAAGTGACTTAGAGACTCAGAAAGAGGCAATCAACAATGGCAGTGGAAATGCTGGTGCTGAAATGGCGCATCAGCCAGTAGCCACCAGTAATGGAGTTGCCAATGCTGTTGTGCAACCCATGATAGCCTCTAGTATGAACATGATCGTTTCAGAGGTTCCTGGTAATCTTGTCCCTGAAAATGGGGAAAGCAAAGCCCAAGATTGA 1758 0.4551 MGEGEGGDYPPKNVSSDATGAALPSDVPAKKLARQLDFTGYSGAALPEHPEPQSQAVVQSQPQPRPVTMQPVILMPMPPQAPHSSASFGKPESPKSRSKPNFDMKDVTPKKQKQCNCKHSKCLKLYCECFASGIYCDGCNCANCYNNVENEAARREAVEATLERNPNAFRPKIASSPHGTRDSREDAGEILILGKHNKGCHCKKSGCLKKYCECFQANILCSENCKCMDCKNFEGSEERQALFHGDQNNNMAYIQQAANAAITGAIGSSGYASPPVSKKRRGQELFFGPTTKDTSVGRLGQFQQANHIKSPAPSSSLCPVPCARVGTAALGPSKFTYRSLLADIIQPQHLKELCSVLVLVSGQAAKTLTDQKMLMEKNAEDQVETSVASSTQEQLPSRKEVDVEKAMADDCSSANQTDKISPDNSSSDGADAPKSRPMSPGTLALMCDEQDTLFMTAPSPNGSLDHACNTSLRSLYGQGMTEVYAEQERIVLTKFRDFLNRVITMGELNETKCSSLTRSDLETQKEAINNGSGNAGAEMAHQPVATSNGVANAVVQPMIASSMNMIVSEVPGNLVPENGESKAQD 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele48g0787 585 Coils Coil 145 165 - -
Lele48g0787 585 MobiDBLite consensus disorder prediction 41 107 - -
Lele48g0787 585 SMART CXC_2 195 236 IPR033467 -
Lele48g0787 585 SMART CXC_2 110 150 IPR033467 -
Lele48g0787 585 MobiDBLite consensus disorder prediction 382 396 - -
Lele48g0787 585 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 112 147 IPR005172 -
Lele48g0787 585 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 198 232 IPR005172 -
Lele48g0787 585 MobiDBLite consensus disorder prediction 379 442 - -
Lele48g0787 585 PANTHER TESMIN/TSO1-RELATED 48 507 IPR028307 -
Lele48g0787 585 ProSiteProfiles CRC domain profile. 111 235 IPR005172 -
Lele48g0787 585 MobiDBLite consensus disorder prediction 410 432 - -
Lele48g0787 585 MobiDBLite consensus disorder prediction 53 67 - -
Lele48g0787 585 MobiDBLite consensus disorder prediction 1 26 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele48g0787 Lele-ChrLele48 13208715 13218813 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele48g0787 1 559 CPP Transcription Factor Family AT4G29000 54.975 0.0 587
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Lele48g0787 TCR 3.1e-12 No_clan