Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele48g0767 ATGGCGTCTTCGATTCATCCCTCTCTCTCCGCCTTCAATCTCTCCGTTCAAAACACTACACGGCTCCTCTCCTTTTCTCGTCAGGTTTTCGTTGTTTCACAGAACAATAGATCTAGCTTGAAAGCATCAAAGCCATTGAGACTAGATGGTAACTGTACGAGAGTAATGGCATCAAGGAGTGTGTTTCAAGCAACCAAAGCTGCTACAACAGAAGACATTCTAGAGTGGGTCAAACAGGACAAGCGAAGAATGCTTCATGTTGTATATCGCGTTGGGGATTTGGACAGGACCATCAAATTTTATACAGAGTGCCTTGGAATGAAGCTGCTGAGAAAACGTGATATACCAGAGGAGAGATACACGAACGCCTTTCTTGGATTTGGGCCTGAAGATGCACACTTCGTTATTGAACTGACGTACAATTATGGGGTTGATGCATATGATATTGGGAATGGATTTGGCCATTTTGGCATTGCTGTTGATGATGTTGAAAAGACTGTAGAACTCATCAGAGCTAAGGGTGGCAAAATAACTAGAGAGCCTGGTCCTGTTAAGGGAGGCGGCACAGTTATTGCTTTCATTGAAGATCCAGATGGATATAAATTTGAGCTTTTGCAAAGAGGTCCCTCTCCCGAGCCTTTGTGCCAAGTAATGCTTCGAGTAGGTGATCTTAATCGTTCAATAGAATTTTACGAGAAGGCTTTTGGTATGGAACTTCTTTGTACACGAGATAATCCTGAGCAAAAGTATACCATTGCAATGCTAAGTTATGGTCCTGAAGATAAAAGTGCTGTTTTGGAATTGACTTACAATTACGGAGTCACTGGATATGATAAAGGAAATGGTTATGCTCAGATTGCAATAGGTACGGATGATGTGTACAGGACTGCTGGAGCTATTAAACTTGTTGGAGGAAAGATTACTCGGGAACCTGGACCATTACCTGGCATCAACACAAAAATAACAGCATGCTTAGATCCTGATGGTTGGAAGACGGTTTTTGTAGATAATGTTGATTTTGTTAAGGAGTTGGAGTAG 1038 0.42 MASSIHPSLSAFNLSVQNTTRLLSFSRQVFVVSQNNRSSLKASKPLRLDGNCTRVMASRSVFQATKAATTEDILEWVKQDKRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEERYTNAFLGFGPEDAHFVIELTYNYGVDAYDIGNGFGHFGIAVDDVEKTVELIRAKGGKITREPGPVKGGGTVIAFIEDPDGYKFELLQRGPSPEPLCQVMLRVGDLNRSIEFYEKAFGMELLCTRDNPEQKYTIAMLSYGPEDKSAVLELTYNYGVTGYDKGNGYAQIAIGTDDVYRTAGAIKLVGGKITREPGPLPGINTKITACLDPDGWKTVFVDNVDFVKELE 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele48g0767 345 ProSitePatterns Glyoxalase I signature 1. 86 107 IPR018146 GO:0004462|GO:0046872
Lele48g0767 345 FunFam Lactoylglutathione lyase 80 209 - -
Lele48g0767 345 FunFam Lactoylglutathione lyase 210 345 - -
Lele48g0767 345 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 213 337 IPR037523 -
Lele48g0767 345 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 83 207 IPR037523 -
Lele48g0767 345 TIGRFAM glyox_I: lactoylglutathione lyase 70 216 IPR004361 GO:0004462|GO:0046872
Lele48g0767 345 TIGRFAM glyox_I: lactoylglutathione lyase 214 338 IPR004361 GO:0004462|GO:0046872
Lele48g0767 345 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 84 204 IPR004360 -
Lele48g0767 345 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 216 331 IPR004360 -
Lele48g0767 345 Gene3D - 55 208 IPR029068 -
Lele48g0767 345 Gene3D - 210 345 IPR029068 -
Lele48g0767 345 ProSitePatterns Glyoxalase I signature 1. 216 237 IPR018146 GO:0004462|GO:0046872
Lele48g0767 345 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 214 337 IPR029068 -
Lele48g0767 345 ProSitePatterns Glyoxalase I signature 2. 150 162 IPR018146 GO:0004462|GO:0046872
Lele48g0767 345 PANTHER LACTOYLGLUTATHIONE LYASE 64 345 - -
Lele48g0767 345 CDD GlxI_Ni 84 205 - -
Lele48g0767 345 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 82 212 IPR029068 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele48g0767 Lele-ChrLele48 13007735 13013511 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele48g0767 216 334 Calmodulin-binding Proteins AT1G08110 28.276 2.70e-10 58.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele46g0720 46 5397131 5398387 Lele48g0767 48 13007735 13013511 hybridization