Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele48g0756 ATGAGTTCCCCAGAAAAAGATAGAGAGAAGATGAGGAACAAGAGAGAGAGAGGTTCAATACTTGAGATTTTCAGATATGCTGAGTGGACTGATGTTGTGCTTATGTTGTTTGGTGCTTTGGGAGCAATAGGAGACGGCATGTCCACAAACGTTTTGCTTGTGTTTGCTAGCCGTATCATGAACAGCTTAGGTTATGGGAATTCTCAACAACAACAAAATAATGGTGGGAATAATTTTTCCATGGCCGAGGTTGAGAAGTGCAGTTTATATTTTGTTTACTTGGGATTAGCAGTCATGGCGTTGGCCTTCATGGAAGGTTATTGCTGGAGCAAAACAAGCGAGAGGCAGGTATTGAGAATTCGGTACAAGTATTTGGAAGCTGTGCTGAGACAAGAAGTGGGATTCTTCAATTCACAAGAAGCAACAACTTCAGACATCATAAACACCATATCAAAGGATACTTCTCTCTTCCAAGAACTTCTCAGTGAAAAGGTGCCTCTATTTTTGATGCATTCATCATCATTCCTCTCAGGGATTGCATTCTCAACGTATTTCTCATGGAGACTAGCCATAGTATCATATCCAACACTACTTCTTCTGATAATACCAGGAATGCTTTATGGGAAATACCTAATATACTTATCAAACAAGTCCCACAAAGAGTATAACAAGGCAAACGCCATTGTAGAGCAAGCTCTAAGCTCCATAAAGACAGTTTATTCCTTCACAGCAGAGAGAAGAATCATGGACAGATATTCAGCAATACTTGAGAGAATCTCAAAGCTTGGAATCAAACAAGGCATAGCCAAGGGCTTGGCTGTGGGAAGCACTGGTTTGTCTTTTGCTATATGGGCGTTTATGGCTTGGTATGGAAGTCGTTTGGTTATGTTCAAAGGTGAAAGTGGAGGAAGAATATATGCAGCTGGCATTTCCTTCATCATGAGTGGGCTATCACTTGGAGTTGCACTTCCTGATCTTAAGTACTTCACAGAAGCATCAGTTGCAGCATCAAGATTATTTGATATGATTGACAGAGTACCAACAATTGATAGTGAAGACACAAGAGGGCTTGTGTTAGATTCCATAACTGGCAAGTTAGAATTTGAACAAGTGAAATTCACATACCCTTCACGTCCAGATACAATTGTTCTTAAGGATTTCAATCTCACAGTTGAATCTGGAACAACTGTGGCTCTTGTTGGTGCAAGTGGAAGTGGAAAGTCCACAGCAATTGGATTAGTGCAAAGATTTTATGATGCAGATGAAGGTTTTGTGAAGGTTGATGGTGTAGACATAAGAAGCCTTCAATTGAAATGGATAAGAGGAAAAATGGGTCTTGTGAGTCAAGAACCAGCATTGTTTGGGACTTCAATAAAGGAGAATATTATGTTTGGGAAACCAGATGCTACTATGGAGGAAGTTATTGCTGCAGCCATGGCTGGCAATGCTCATAACTTCATTAGGCAGCTTCCAGAAGGTTATGAAACTAAAATTGGAGAAAGAGGGGCACTTCTATCAGGTGGACAAAAGCAGAGAATAGCAATTGCAAGAGCCATCATTAAGAATCCTGTGATTCTCCTACTTGATGAAGCGACTAGTGCTCTTGATTCTGAATCAGAACTTCTAGTTCAGAATGCACTTGATCAGGCCTCCATGGGAAGGACCACTTTGGTTGTTTCTCACAAGCTATCAACAGTTAGAAATGCAGACCTCATAGCAGTTGTCAATTGTGGCTGCATCATTGAAACAGGTACACACAATGAACTCCTCAACCGCGAAAATGGGCACTACGCAAAACTAGCAAAGTTGCAATTCAGTTGCGAAGAACATGCGCAGAACCCGGACCAGATTGTTTCTTCTGTTGCCAGAAGCAGTGCTGGTAGACCAAGTACTGCAAGATCAAGCCCTTCACTTTTCCCAAAATCACCATTAGTGCCTGATACTACTACCCCACCACTCGAGTCTCACCCGCCACCTTCTTTACCTCGTCTTCTTTCTCTAAATGCTCCTGAATGGAAACAAGGTCTTGTTGGAAGCCTCTCAGCTATAGCTTTTGGTTCAATACAACCCATATATGCTTTAACCATTGGGGGTATGATTTCTTCATTTTTTGTTGAGAGCCATGAGGAAATGAGTCATAGGATAAGAACTTATTCCTTTATTTTCTCTTCATTATCCCTTGCTTCTATAATTCTCAATCTCTTCCAACATTACAATTTTGCATATATGGGAGAGAAATTAACAAAGAGGATAAGATTACAAATGCTAGAGAAAATCTTAACCTTTGAAACTGCCTGGTTTGATGAGGAACAGAACTCTAGTGGAGCCTTATGTTCAAGATTGAGCAATGAAGCTTCCATGGTGAAATCACTCGTCGCGAACCGCGTCTCTTTAATAGTTCAAACCACTTCTGCTGTCACAATTGCAATGATCATAGGGCTTATTGTGGCTTGGAAGCTTGGTCTTGTTATGATGGCTGTACAACCACTTACAATTCTCTGCTTCTATACAAGAAAAGTTCTTCTCTCAACACTTTCAACTAATTTTGTCAAGGCTCAGAATCATAGCACACAAATTGCAGTAGAAGCTGTTTATAATCATAAAATAGTGATTTCCTTTGGGAGCAACAAGAAAGTTGTACAACTATTTGATGAAGCTCAAGAGGCACCTAGGAAGGAAGCCAGAAAGAAGTCTTGGCTTGCCGGGATCGGGATGGGTTCGGCTCAGGGCCTAACTTTCATGACATGGGCTTTGGATTTCTGGTATGGTGGGAAATTAGTGCAGAAAGGAGAAATATCAGCAGGGGATGTATTCAAGACATTTTTTGTATTGGTGAGCACAGGTAAAGTCATAGCTGAAGCTGGAAGCATGACTTCTGATCTTGCTAAGGGTTCAGCAGCAGTAGCATCTGTTTTCACAATTCTTGATCGTCAATCATTAATCCCAAAGGGTGGGAATGGCAGTAATGGGTGCAAGTTATTGAAAATGAGAGGGAAAATAGAGATGAAGGATGTTGATTTTGCATACCCAAGCAGGGCAGGGACTCCAATACTGAGAAAATTTTGCTTGGAGGTGAAATCAGGAACAAGCATAGGAGTGGTGGGGAAAAGTGGGAGTGGGAAATCAACAGTGATAGCTTTAATTCAGAGATTCTATGATGTTCAAAGAGGCTCTATCAAAGTGGATGATGTAGACATAAGAGAATTGGACATTCAGTGGTACAGAAAACACACAGCACTTGTTAGCCAAGAACCTGTAATATACTCAGGAAGCATAAGAGATAACATCTTATTTGGAAAACAAGATGCAACAGAAAGTGAAGTTGTTGAAGCTGCAAGAGCTGCTAATGCTCATGACTTCATTTCATCACTGAAAGATGGGTATGAAACAGAATGTGGAGAAAGAGGAGTACAATTATCAGGAGGGCAAAAGCAGAGAATAGCAATTGCAAGAGCCATAATCAGAAACCCAACAATACTTCTGTTGGATGAAGCAACCAGTGCGTTAGACGTTCAATCAGAGCAAGTTGTACAAGAAGCACTTGATAGAATCATGGTGGGAAGGACTACCATTGTGGTGGCTCACAGGCTTAACACCATTAGAGAGCTTCAATCAATTGCTTATGTTTCAGACGGCAAAGTTCTTGAACAAGGAACCTATTCACAGCTTTGGCACAAGAAAGGCGCTTTCTTTAACCTTATTTTATCTTAA 3711 0.4085 MSSPEKDREKMRNKRERGSILEIFRYAEWTDVVLMLFGALGAIGDGMSTNVLLVFASRIMNSLGYGNSQQQQNNGGNNFSMAEVEKCSLYFVYLGLAVMALAFMEGYCWSKTSERQVLRIRYKYLEAVLRQEVGFFNSQEATTSDIINTISKDTSLFQELLSEKVPLFLMHSSSFLSGIAFSTYFSWRLAIVSYPTLLLLIIPGMLYGKYLIYLSNKSHKEYNKANAIVEQALSSIKTVYSFTAERRIMDRYSAILERISKLGIKQGIAKGLAVGSTGLSFAIWAFMAWYGSRLVMFKGESGGRIYAAGISFIMSGLSLGVALPDLKYFTEASVAASRLFDMIDRVPTIDSEDTRGLVLDSITGKLEFEQVKFTYPSRPDTIVLKDFNLTVESGTTVALVGASGSGKSTAIGLVQRFYDADEGFVKVDGVDIRSLQLKWIRGKMGLVSQEPALFGTSIKENIMFGKPDATMEEVIAAAMAGNAHNFIRQLPEGYETKIGERGALLSGGQKQRIAIARAIIKNPVILLLDEATSALDSESELLVQNALDQASMGRTTLVVSHKLSTVRNADLIAVVNCGCIIETGTHNELLNRENGHYAKLAKLQFSCEEHAQNPDQIVSSVARSSAGRPSTARSSPSLFPKSPLVPDTTTPPLESHPPPSLPRLLSLNAPEWKQGLVGSLSAIAFGSIQPIYALTIGGMISSFFVESHEEMSHRIRTYSFIFSSLSLASIILNLFQHYNFAYMGEKLTKRIRLQMLEKILTFETAWFDEEQNSSGALCSRLSNEASMVKSLVANRVSLIVQTTSAVTIAMIIGLIVAWKLGLVMMAVQPLTILCFYTRKVLLSTLSTNFVKAQNHSTQIAVEAVYNHKIVISFGSNKKVVQLFDEAQEAPRKEARKKSWLAGIGMGSAQGLTFMTWALDFWYGGKLVQKGEISAGDVFKTFFVLVSTGKVIAEAGSMTSDLAKGSAAVASVFTILDRQSLIPKGGNGSNGCKLLKMRGKIEMKDVDFAYPSRAGTPILRKFCLEVKSGTSIGVVGKSGSGKSTVIALIQRFYDVQRGSIKVDDVDIRELDIQWYRKHTALVSQEPVIYSGSIRDNILFGKQDATESEVVEAARAANAHDFISSLKDGYETECGERGVQLSGGQKQRIAIARAIIRNPTILLLDEATSALDVQSEQVVQEALDRIMVGRTTIVVAHRLNTIRELQSIAYVSDGKVLEQGTYSQLWHKKGAFFNLILS 1236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele48g0756 1236 ProSitePatterns ABC transporters family signature. 505 519 IPR017871 GO:0005524|GO:0016887
Lele48g0756 1236 CDD ABC_MTABC3_MDL1_MDL2 367 604 - -
Lele48g0756 1236 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 990 1234 IPR027417 -
Lele48g0756 1236 SMART AAA_5 1027 1213 IPR003593 -
Lele48g0756 1236 SMART AAA_5 393 585 IPR003593 -
Lele48g0756 1236 MobiDBLite consensus disorder prediction 645 659 - -
Lele48g0756 1236 FunFam Putative ABC transporter B family member 8 646 985 - -
Lele48g0756 1236 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 36 331 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele48g0756 1236 CDD ABC_MTABC3_MDL1_MDL2 1000 1234 - -
Lele48g0756 1236 FunFam ABC transporter B family member 4 356 611 - -
Lele48g0756 1236 CDD ABC_6TM_Pgp_ABCB1_D2_like 665 981 - -
Lele48g0756 1236 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 366 602 IPR003439 GO:0005524
Lele48g0756 1236 Gene3D ABC transporter type 1, transmembrane domain 22 913 IPR036640 GO:0005524|GO:0016020
Lele48g0756 1236 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1000 1236 IPR003439 GO:0005524
Lele48g0756 1236 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 357 605 IPR027417 -
Lele48g0756 1236 Gene3D - 356 613 IPR027417 -
Lele48g0756 1236 SUPERFAMILY ABC transporter transmembrane region 23 350 IPR036640 GO:0005524|GO:0016020
Lele48g0756 1236 ProSitePatterns ABC transporters family signature. 1139 1153 IPR017871 GO:0005524|GO:0016887
Lele48g0756 1236 MobiDBLite consensus disorder prediction 620 644 - -
Lele48g0756 1236 Pfam ABC transporter 1021 1167 IPR003439 GO:0005524
Lele48g0756 1236 FunFam ABC transporter B family member 1 22 362 - -
Lele48g0756 1236 Pfam ABC transporter 384 533 IPR003439 GO:0005524
Lele48g0756 1236 FunFam ABC multidrug transporter SitT 990 1235 - -
Lele48g0756 1236 MobiDBLite consensus disorder prediction 620 660 - -
Lele48g0756 1236 CDD ABC_6TM_Pgp_ABCB1_D1_like 35 339 - -
Lele48g0756 1236 Pfam ABC transporter transmembrane region 680 946 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele48g0756 1236 Pfam ABC transporter transmembrane region 39 303 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele48g0756 1236 PANTHER ABC TRANSPORTER B FAMILY 5 688 - -
Lele48g0756 1236 SUPERFAMILY ABC transporter transmembrane region 659 976 IPR036640 GO:0005524|GO:0016020
Lele48g0756 1236 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 676 963 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele48g0756 1236 Gene3D - 991 1236 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele48g0756 Lele-ChrLele48 12879660 12889878 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele48g0756 2 604 Calmodulin-binding Proteins AT2G36910 34.697 2.89e-98 340