Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele48g0750 ATGAGCAAGATAGACCTGGCAGTGTTGTTGGCAGAGAGGAAAGAGGGTGGTGGGCCGTTATTGGCAGTAATGGCCATGCCTTTGGACGGCGCCACCAAGGATAAAATTAGCAAGAGAGTCTATGAACTGATACGAGGGGCCACTAATGTTGGATTGTTCAAGAAAGTGTTTTGGCCCCGTTTGCTTCTCCGATGTGCAAATTCAATTCTGGCTTCCTCCTCAAACTCATCACCAAAATCCCATTTTCCTCTTCAAAAATCACTACAAGTGAATTCACACAACACCCAGATGAGAAATTCAACTCCTTTCTTCTTCTTCCTTCTCCTTCTGAGCTCTGTGAATTCTCAGTCTGAACTTTATGATCAAGAACACGCAGTGTTACTGAGGATGAAGCAGTATTTCAAAAACCTATCTTCTCTCAGTCACTGGACACAATCATCATCATCTCATTGTTCATGGACAGAGATCACCTGCAACAATAACTCTGTTACAGGGTTGGCTCTGAAGAACATCAGTATTACCCAACCGATACCAACTTTCACCTGTGACCTTAAAAGCCTCACTTCTATTGATTTACAATGGAATTTCATTCCTGGGGAATTCCCAACTTTTCTCTACAACTGTTCCAAGTTGGAGTACTTGGACCTCTCTAATAATTACTTTGTTGGTAAGGTTCCAGAGGACATAGACCGATTGAGTAGCCTGCGTTTTCTTAATCTCGGCGGTAACAACTTCTCCGGCGAGATTCCGGCGAGCATTACGCGTTTAAAAGAGCTCACAAGTCTCCAGCTTAATCAATGTTTCTTTAATGGAACTATCCCAATTGAAATAGGCAAGTTATCCAATCTTGAAGTCTTGAATCTGGGCCCCAATTCATTCTCTCCTTCAAATCTTCCTTCTAGCTTCTTCACCAAGCTCACAAAATTGAAGGATCTCCAGATGTCGGACTGCAACTTGATCGGCGAAATCCCAGAAAGTGTTGAGAAACTGGTGGACTTGGAGATGTTGGATTTATCCATGAATCAGTTAATGGGGAAAATTCCAAGTGGCTTGTTTATGCTGAAGAATCTAAGCATAATGTTTCTTTCAAGGAATCAGCTTAATGGTGAGCTACCTCAAGTGATTGAAGCCTTAAACTTGACGATCGTCGATCTCGCTCGAAACAACCTCACCGGGAAGATACCTAATAGCTTTGGAAATCTCCATAAGCTAACTGGTTTGAACTTTGGTCTTAATCAATTATCAGGTGAGATTCCAGAAAGCTTAGGCCGTCTTCAATCTATAATAGATTTCGGCGTTATCATGAACAATTTATCTGGCAATATTCCTTCTGAGTTTGGTCTCCATTCAAATCTCAGAAGATTTGAACTTGCATCAAACAGTTTCACTGGTAATCTTCCTCAGAACTTGTGTTACCATGGGAATTTATTTCGATTAACGGCTTACGACAACAAACTTGGTGGCGAATTACCAGAATCATTGGGAAATTGTAGGAGCTTGCTTGAGTTGAAGGTTTACAATAATGAGTTTTCTGGTGAAATTCCTAGAGGACTTTGGGAGTCTCAGAATATGTCAACTTTCATGATCAATGACAATAAGTTCACAGGTGAGCTTCCTGAGAATTTGCCTGTGAATGTTTCACTCATGACGATTAGTTACAATCGGTTTTCGGGTCGAATTCCGAAAGGAATATCTTCCATGAAGAATCTGGTTGTGTTTAATGCAAGTAGCAATCTTTTTAATGGAAGTATTCCAATAGAGCTAACCAGTCTTTCTCAGTTATCCACTTTGTTGCTTGATCAGAACAAATTTTCTGGGCCATTTCCATCTGAAATTCTATCATGGAAATCTCTAAGAACTATAAACTTGAGCCGAAATCTACTCTCCGGAGAAATCCCGGATTCGATCGGTCATTTGATTGATCTCGCGCAACTAGATTTGTCAGAAAATCAATTCTCTGGCCAAATTCCATCCCAACTAGCCTCTTTGACACCTTCTGTTCTCAACCTTTCCTCGAATCATTTCACCGGGAAGATTCCGAGTGAATTTGAGAATCTTGCTTACGCCACAAGCTTCTTGAACAATTCTGGTCTTTGTTCTGATACAGCTGGATTAAACCTTAAATTCTGCAATTCTGGTAATTCTGTCCCTCAAAGCTCGAGCAATAAAGGCGGCTCATCATCTATGTCTCTTGGTTTGATCTTAGGCCTTGCAGTAGTAGTCTGCATAGCAATTTTCTTCTTGTCATTTTTGTTGATGAGATTATACCAAAAGAGAAAGCAAGAATTGGACACTTCATGGAAGTTAACTTCTTTCCAAAATCTAAGTTTCACAGAATCAAAAATTGTCTCATCCATGACAGACCATAACATCATAGGCCGAGGAGGATACGGTATAGTTTACCGTATCGCCGTCAACGATAAAGACGACTACGTTGCCGTGAAGAAGATAAGCAATAACAGGAAATTAGATCATAAACTTGAGAATGCATTTTATGCTGAAGTTGAAATCTTGGGAACTATTCGTCACATTAACATAGTAAAATTGCTATGTTGTATTTCTAATGAGGATTCTCTGCTTCTTGTTTATGAGTATTTGGAACATCGAAGTCTTGATAAGTGGCTACACAAGACGAATAATGGATCATCTGGTTTGTTATCATCTACTACAGTTCCTAGTGTTGTTCTTGATTGGCGGAAGAGATTGAATATAGCCATCGGGATCGCGCAAGGTTTGAGCTATATGCATCATGACAACTCGCCGCCTATTATTCACCGTGATGTCAAAACAAGTAATATTCTTTTGGATTCTGAGTTCAATGCAAAAGTCGCAGATTTTGGTCTTGCAAGGATGTTGATCAAACCAGAACAACATGATACTATGTCATCTGTTGTTGGCTCTTTTGGTTATATTGCTCCAGAATATGCTCAAACGAAAAGAGTGAATGAGAAGGTTGATGTGTATAGCTTCGGGGTGATCCTGCTGGAGCTGACAACAGGAAAAGAAGCTAACTATGGAGATGAACACTCGTCCCTTGCAGAATGGGCATGGCGTGAGATTCGACATGGAAACAACATAGAACAAGTTCTAGACGAAGATGTTAAGGAAAATCCATACTTGGATGAAATGTGCAGTGTCTTCAAGCTTGGAGTGATGTGTACAAGCAAAGAACCAGCTGGTAGGCCAACCATGAAGGAGGTTCTGAATATATTGCTTCGCTTGAAAGGACCAGCTGGTTATGTAGAAATCATGAATTTTGGTCATCTTGAGGTTGTTCCTCTGCTAAAGAACTCTAAGAGAGAGAGTAGGATAGATATTGATAATGATAGCTAA 3333 0.4032 MSKIDLAVLLAERKEGGGPLLAVMAMPLDGATKDKISKRVYELIRGATNVGLFKKVFWPRLLLRCANSILASSSNSSPKSHFPLQKSLQVNSHNTQMRNSTPFFFFLLLLSSVNSQSELYDQEHAVLLRMKQYFKNLSSLSHWTQSSSSHCSWTEITCNNNSVTGLALKNISITQPIPTFTCDLKSLTSIDLQWNFIPGEFPTFLYNCSKLEYLDLSNNYFVGKVPEDIDRLSSLRFLNLGGNNFSGEIPASITRLKELTSLQLNQCFFNGTIPIEIGKLSNLEVLNLGPNSFSPSNLPSSFFTKLTKLKDLQMSDCNLIGEIPESVEKLVDLEMLDLSMNQLMGKIPSGLFMLKNLSIMFLSRNQLNGELPQVIEALNLTIVDLARNNLTGKIPNSFGNLHKLTGLNFGLNQLSGEIPESLGRLQSIIDFGVIMNNLSGNIPSEFGLHSNLRRFELASNSFTGNLPQNLCYHGNLFRLTAYDNKLGGELPESLGNCRSLLELKVYNNEFSGEIPRGLWESQNMSTFMINDNKFTGELPENLPVNVSLMTISYNRFSGRIPKGISSMKNLVVFNASSNLFNGSIPIELTSLSQLSTLLLDQNKFSGPFPSEILSWKSLRTINLSRNLLSGEIPDSIGHLIDLAQLDLSENQFSGQIPSQLASLTPSVLNLSSNHFTGKIPSEFENLAYATSFLNNSGLCSDTAGLNLKFCNSGNSVPQSSSNKGGSSSMSLGLILGLAVVVCIAIFFLSFLLMRLYQKRKQELDTSWKLTSFQNLSFTESKIVSSMTDHNIIGRGGYGIVYRIAVNDKDDYVAVKKISNNRKLDHKLENAFYAEVEILGTIRHINIVKLLCCISNEDSLLLVYEYLEHRSLDKWLHKTNNGSSGLLSSTTVPSVVLDWRKRLNIAIGIAQGLSYMHHDNSPPIIHRDVKTSNILLDSEFNAKVADFGLARMLIKPEQHDTMSSVVGSFGYIAPEYAQTKRVNEKVDVYSFGVILLELTTGKEANYGDEHSSLAEWAWREIRHGNNIEQVLDEDVKENPYLDEMCSVFKLGVMCTSKEPAGRPTMKEVLNILLRLKGPAGYVEIMNFGHLEVVPLLKNSKRESRIDIDNDS 1110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele48g0750 1110 ProSitePatterns Serine/Threonine protein kinases active-site signature. 923 935 IPR008271 GO:0004672|GO:0006468
Lele48g0750 1110 Gene3D Transferase(Phosphotransferase) domain 1 866 1079 - -
Lele48g0750 1110 SMART LRR_typ_2 401 425 IPR003591 -
Lele48g0750 1110 SMART LRR_typ_2 330 354 IPR003591 -
Lele48g0750 1110 SMART LRR_typ_2 232 256 IPR003591 -
Lele48g0750 1110 SMART LRR_typ_2 184 208 IPR003591 -
Lele48g0750 1110 SMART LRR_typ_2 639 663 IPR003591 -
Lele48g0750 1110 SMART LRR_typ_2 280 305 IPR003591 -
Lele48g0750 1110 FunFam Receptor-like protein kinase HSL1 isoform A 120 271 - -
Lele48g0750 1110 SUPERFAMILY Protein kinase-like (PK-like) 771 1071 IPR011009 -
Lele48g0750 1110 Pfam Leucine Rich Repeat 617 639 IPR001611 GO:0005515
Lele48g0750 1110 Pfam Leucine Rich Repeat 379 401 IPR001611 GO:0005515
Lele48g0750 1110 Pfam Leucine Rich Repeat 667 686 IPR001611 GO:0005515
Lele48g0750 1110 Gene3D Ribonuclease Inhibitor 300 433 IPR032675 -
Lele48g0750 1110 Gene3D Ribonuclease Inhibitor 120 299 IPR032675 -
Lele48g0750 1110 Pfam Leucine rich repeat N-terminal domain 122 159 IPR013210 -
Lele48g0750 1110 SUPERFAMILY L domain-like 125 376 - -
Lele48g0750 1110 FunFam Kinase family with leucine-rich repeat domain-containing protein 866 1082 - -
Lele48g0750 1110 FunFam Receptor-like protein kinase HSL1 766 865 - -
Lele48g0750 1110 Pfam Leucine rich repeat 186 245 IPR001611 GO:0005515
Lele48g0750 1110 ProSiteProfiles Protein kinase domain profile. 786 1074 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele48g0750 1110 SUPERFAMILY RNI-like 311 676 - -
Lele48g0750 1110 ProSitePatterns Protein kinases ATP-binding region signature. 792 816 IPR017441 GO:0005524
Lele48g0750 1110 Gene3D Ribonuclease Inhibitor 434 712 IPR032675 -
Lele48g0750 1110 FunFam Leucine-rich repeat receptor-like protein kinase TDR 398 712 - -
Lele48g0750 1110 Pfam Protein kinase domain 788 1069 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele48g0750 1110 Gene3D Phosphorylase Kinase; domain 1 756 865 - -
Lele48g0750 1110 SMART serkin_6 786 1072 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele48g0750 1110 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 274 371 - -
Lele48g0750 1110 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 282 1066 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele48g0750 Lele-ChrLele48 12819756 12829177 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele48g0750 123 1071 Receptor kinase-like Gene Family AT5G25930 52.147 0.0 937
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lele48g0750 Pkinase 3.5e-51 CL0016